Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CPSF7Q8N684 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF7Q8N684 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.01■□□□□ 0.95
CPSF7Q8N684 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF7Q8N684 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF7Q8N684 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF7Q8N684 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPSF7Q8N684 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21■□□□□ 0.95
CPSF7Q8N684 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CPSF7Q8N684 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21■□□□□ 0.95
CPSF7Q8N684 AC073130.3-201ENST00000624389 2278 ntBASIC21■□□□□ 0.95
CPSF7Q8N684 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21■□□□□ 0.95
CPSF7Q8N684 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21■□□□□ 0.95
CPSF7Q8N684 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CPSF7Q8N684 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
CPSF7Q8N684 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
CPSF7Q8N684 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CPSF7Q8N684 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CPSF7Q8N684 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPSF7Q8N684 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CPSF7Q8N684 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CPSF7Q8N684 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPSF7Q8N684 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CPSF7Q8N684 Z98882.1-201ENST00000622160 2253 ntBASIC20.99■□□□□ 0.95
CPSF7Q8N684 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPSF7Q8N684 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.99■□□□□ 0.95
CPSF7Q8N684 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
CPSF7Q8N684 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPSF7Q8N684 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CPSF7Q8N684 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPSF7Q8N684 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPSF7Q8N684 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPSF7Q8N684 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.98■□□□□ 0.95
CPSF7Q8N684 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPSF7Q8N684 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CPSF7Q8N684 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPSF7Q8N684 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
CPSF7Q8N684 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.98■□□□□ 0.95
CPSF7Q8N684 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPSF7Q8N684 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.97■□□□□ 0.95
CPSF7Q8N684 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPSF7Q8N684 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.97■□□□□ 0.95
CPSF7Q8N684 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.97■□□□□ 0.95
CPSF7Q8N684 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPSF7Q8N684 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPSF7Q8N684 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPSF7Q8N684 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.97■□□□□ 0.95
CPSF7Q8N684 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPSF7Q8N684 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CPSF7Q8N684 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPSF7Q8N684 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPSF7Q8N684 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPSF7Q8N684 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPSF7Q8N684 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CPSF7Q8N684 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPSF7Q8N684 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPSF7Q8N684 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPSF7Q8N684 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.96■□□□□ 0.95
CPSF7Q8N684 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPSF7Q8N684 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPSF7Q8N684 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.96■□□□□ 0.95
CPSF7Q8N684 AC005703.6-201ENST00000623265 1329 ntBASIC20.96■□□□□ 0.95
CPSF7Q8N684 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CPSF7Q8N684 FEM1AP4-201ENST00000443167 1987 ntBASIC20.96■□□□□ 0.95
CPSF7Q8N684 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPSF7Q8N684 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.95■□□□□ 0.95
CPSF7Q8N684 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CPSF7Q8N684 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPSF7Q8N684 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CPSF7Q8N684 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.95■□□□□ 0.94
CPSF7Q8N684 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPSF7Q8N684 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.95■□□□□ 0.94
CPSF7Q8N684 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.95■□□□□ 0.94
CPSF7Q8N684 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.95■□□□□ 0.94
CPSF7Q8N684 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.95■□□□□ 0.94
CPSF7Q8N684 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.95■□□□□ 0.94
CPSF7Q8N684 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.95■□□□□ 0.94
CPSF7Q8N684 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.95■□□□□ 0.94
CPSF7Q8N684 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF7Q8N684 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF7Q8N684 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.94■□□□□ 0.94
CPSF7Q8N684 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.94■□□□□ 0.94
CPSF7Q8N684 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF7Q8N684 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF7Q8N684 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF7Q8N684 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF7Q8N684 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF7Q8N684 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF7Q8N684 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF7Q8N684 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF7Q8N684 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CPSF7Q8N684 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF7Q8N684 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF7Q8N684 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CPSF7Q8N684 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF7Q8N684 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.94■□□□□ 0.94
CPSF7Q8N684 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPSF7Q8N684 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.93■□□□□ 0.94
CPSF7Q8N684 AC004687.1-201ENST00000579003 1625 ntBASIC20.93■□□□□ 0.94
CPSF7Q8N684 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms