Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD2Q8IV50 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD2Q8IV50 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LYSMD2Q8IV50 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD2Q8IV50 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD2Q8IV50 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD2Q8IV50 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.9■□□□□ 0.62
LYSMD2Q8IV50 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.9■□□□□ 0.62
LYSMD2Q8IV50 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD2Q8IV50 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD2Q8IV50 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.89■□□□□ 0.61
LYSMD2Q8IV50 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD2Q8IV50 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD2Q8IV50 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
LYSMD2Q8IV50 AC087393.1-201ENST00000582896 145 ntBASIC18.89■□□□□ 0.61
LYSMD2Q8IV50 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.89■□□□□ 0.61
LYSMD2Q8IV50 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD2Q8IV50 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.89■□□□□ 0.61
LYSMD2Q8IV50 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD2Q8IV50 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD2Q8IV50 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.88■□□□□ 0.61
LYSMD2Q8IV50 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD2Q8IV50 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LYSMD2Q8IV50 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD2Q8IV50 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD2Q8IV50 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.88■□□□□ 0.61
LYSMD2Q8IV50 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD2Q8IV50 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LYSMD2Q8IV50 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.88■□□□□ 0.61
LYSMD2Q8IV50 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD2Q8IV50 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD2Q8IV50 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD2Q8IV50 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD2Q8IV50 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD2Q8IV50 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD2Q8IV50 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD2Q8IV50 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
LYSMD2Q8IV50 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.88■□□□□ 0.61
LYSMD2Q8IV50 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD2Q8IV50 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
LYSMD2Q8IV50 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD2Q8IV50 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.87■□□□□ 0.61
LYSMD2Q8IV50 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD2Q8IV50 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD2Q8IV50 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD2Q8IV50 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD2Q8IV50 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.87■□□□□ 0.61
LYSMD2Q8IV50 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD2Q8IV50 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
LYSMD2Q8IV50 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD2Q8IV50 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
LYSMD2Q8IV50 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 AC018755.3-202ENST00000596210 929 ntBASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
LYSMD2Q8IV50 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LYSMD2Q8IV50 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD2Q8IV50 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD2Q8IV50 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD2Q8IV50 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD2Q8IV50 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD2Q8IV50 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD2Q8IV50 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD2Q8IV50 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD2Q8IV50 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD2Q8IV50 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.85■□□□□ 0.61
LYSMD2Q8IV50 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.85■□□□□ 0.61
LYSMD2Q8IV50 SPCS2P3-201ENST00000500401 656 ntBASIC18.85■□□□□ 0.61
LYSMD2Q8IV50 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.85■□□□□ 0.61
LYSMD2Q8IV50 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD2Q8IV50 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD2Q8IV50 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD2Q8IV50 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD2Q8IV50 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD2Q8IV50 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LYSMD2Q8IV50 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms