Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 RAB6A-206ENST00000540771 699 ntTSL 524.44■■□□□ 1.54e-9■■■■□ 24.5
MATR3P43243 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC24.11■■□□□ 1.454e-11■■■■□ 24.5
MATR3P43243 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.96■■□□□ 1.434e-9■■■■□ 24.5
MATR3P43243 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.94■■□□□ 1.424e-12■■■■□ 24.5
MATR3P43243 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.423e-7■■■■□ 24.5
MATR3P43243 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.82■■□□□ 1.243e-7■■■■□ 24.5
MATR3P43243 ZNF451-209ENST00000502749 790 ntTSL 521.22■□□□□ 0.993e-7■■■■□ 24.5
MATR3P43243 ZNF451-216ENST00000510483 719 ntTSL 421.02■□□□□ 0.963e-7■■■■□ 24.5
MATR3P43243 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.99■□□□□ 0.959e-10■■■■□ 24.5
MATR3P43243 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.88■□□□□ 0.774e-9■■■■□ 24.5
MATR3P43243 IP6K1-208ENST00000498149 687 ntTSL 419.29■□□□□ 0.689e-10■■■■□ 24.5
MATR3P43243 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.673e-7■■■■□ 24.5
MATR3P43243 RAB6A-208ENST00000541795 1812 ntTSL 219.24■□□□□ 0.674e-9■■■■□ 24.5
MATR3P43243 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.513e-7■■■■□ 24.5
MATR3P43243 ZNF451-213ENST00000508603 538 ntTSL 418.04■□□□□ 0.483e-7■■■■□ 24.5
MATR3P43243 ZNF451-207ENST00000444273 3402 ntTSL 1 (best)17.73■□□□□ 0.433e-7■■■■□ 24.5
MATR3P43243 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.393e-7■■■■□ 24.5
MATR3P43243 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.68■□□□□ 0.269e-10■■■■□ 24.5
MATR3P43243 SMURF1-203ENST00000472627 825 ntTSL 215.14■□□□□ 0.013e-7■■■■□ 24.5
MATR3P43243 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC14.69□□□□□ -0.069e-10■■■■□ 24.5
MATR3P43243 IP6K1-201ENST00000321599 4456 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.079e-10■■■■□ 24.5
MATR3P43243 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.074e-9■■■■□ 24.5
MATR3P43243 PRRC2B-208ENST00000465931 5366 ntTSL 214.38□□□□□ -0.113e-7■■■■□ 24.5
MATR3P43243 ZNF451-206ENST00000370711 609 ntTSL 414.37□□□□□ -0.113e-7■■■■□ 24.5
MATR3P43243 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.174e-9■■■■□ 24.5
MATR3P43243 RAD54L-210ENST00000488942 1121 ntTSL 313.71□□□□□ -0.213e-7■■■■□ 24.5
MATR3P43243 NCAPG2-201ENST00000356309 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.413e-7■■■■□ 24.5
MATR3P43243 ZNF451-205ENST00000370710 375 ntTSL 2 BASIC12.29□□□□□ -0.443e-7■■■■□ 24.5
MATR3P43243 IP6K1-209ENST00000613416 4806 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.459e-10■■■■□ 24.5
MATR3P43243 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC11.9□□□□□ -0.52e-6■■■■□ 24.5
MATR3P43243 N4BP2L2-212ENST00000505213 2343 ntTSL 511.44□□□□□ -0.583e-7■■■■□ 24.5
MATR3P43243 SLC25A44-201ENST00000359511 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.623e-7■■■■□ 24.5
MATR3P43243 RAD54L-202ENST00000442598 2549 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.673e-7■■■■□ 24.5
MATR3P43243 SLC25A44-202ENST00000423538 3662 ntTSL 1 (best) BASIC10.84□□□□□ -0.673e-7■■■■□ 24.5
MATR3P43243 NACA-215ENST00000550920 752 ntTSL 510.75□□□□□ -0.693e-7■■■■□ 24.5
MATR3P43243 SLC25A44-204ENST00000469537 6952 ntTSL 1 (best)10.67□□□□□ -0.73e-7■■■■□ 24.5
MATR3P43243 RAB6A-209ENST00000541973 1104 ntTSL 2 BASIC10.27□□□□□ -0.774e-9■■■■□ 24.5
MATR3P43243 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.83e-7■■■■□ 24.5
MATR3P43243 NCAPG2-204ENST00000432615 4134 ntTSL 59.95□□□□□ -0.823e-7■■■■□ 24.5
MATR3P43243 RAD54L-201ENST00000371975 3108 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.833e-7■■■■□ 24.5
MATR3P43243 RAD54L-203ENST00000459678 775 ntTSL 59.78□□□□□ -0.843e-7■■■■□ 24.5
MATR3P43243 NCAPG2-205ENST00000441982 2926 ntTSL 29.52□□□□□ -0.883e-7■■■■□ 24.5
MATR3P43243 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC9.44□□□□□ -0.93e-7■■■■□ 24.5
MATR3P43243 NCAPG2-206ENST00000467785 3276 ntTSL 1 (best)9.25□□□□□ -0.933e-7■■■■□ 24.5
MATR3P43243 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.112e-9■■■■□ 24.5
MATR3P43243 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.82□□□□□ -1.163e-7■■■■□ 24.5
MATR3P43243 RAB6A-205ENST00000537446 447 ntTSL 37.68□□□□□ -1.184e-9■■■■□ 24.5
MATR3P43243 RAB6A-210ENST00000545625 447 ntTSL 37.66□□□□□ -1.184e-9■■■■□ 24.5
MATR3P43243 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.67□□□□□ -1.343e-7■■■■□ 24.5
MATR3P43243 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.11□□□□□ -1.433e-7■■■■□ 24.5
MATR3P43243 N4BP2L2-206ENST00000473025 273 ntTSL 45.85□□□□□ -1.473e-7■■■■□ 24.5
MATR3P43243 N4BP2L2-213ENST00000509076 3060 ntTSL 55.5□□□□□ -1.533e-7■■■■□ 24.5
MATR3P43243 SLC25A44-203ENST00000468973 271 ntTSL 35.14□□□□□ -1.593e-7■■■■□ 24.5
MATR3P43243 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.56□□□□□ -1.683e-7■■■■□ 24.5
MATR3P43243 ZNF451-217ENST00000510989 558 ntTSL 54.45□□□□□ -1.73e-7■■■■□ 24.5
MATR3P43243 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.34□□□□□ -1.713e-7■■■■□ 24.5
MATR3P43243 ZNF451-218ENST00000515290 581 ntTSL 43.83□□□□□ -1.83e-7■■■■□ 24.5
MATR3P43243 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.34□□□□□ -1.873e-7■■■■□ 24.5
MATR3P43243 ZNF451-211ENST00000504603 561 ntTSL 53.29□□□□□ -1.883e-7■■■■□ 24.5
MATR3P43243 RAB6A-203ENST00000400470 522 ntTSL 33.11□□□□□ -1.914e-9■■■■□ 24.5
MATR3P43243 ZNF451-214ENST00000509071 477 ntTSL 52.98□□□□□ -1.933e-7■■■■□ 24.5
MATR3P43243 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.69□□□□□ -1.983e-7■■■■□ 24.5
MATR3P43243 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.013e-7■■■■□ 24.5
MATR3P43243 ATP7B-216ENST00000635406 506 ntTSL 422.92■■□□□ 1.263e-7■■■■□ 24.5
MATR3P43243 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC15.41■□□□□ 0.063e-7■■■■□ 24.5
MATR3P43243 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.093e-7■■■■□ 24.5
MATR3P43243 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.233e-7■■■■□ 24.5
MATR3P43243 ATP7B-204ENST00000400370 3252 ntTSL 1 (best) BASIC11.35□□□□□ -0.593e-7■■■■□ 24.5
MATR3P43243 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.633e-7■■■■□ 24.5
MATR3P43243 ATP7B-205ENST00000418097 4340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.643e-7■■■■□ 24.5
MATR3P43243 ATP7B-211ENST00000634308 4321 ntTSL 1 (best)11□□□□□ -0.653e-7■■■■□ 24.5
MATR3P43243 ATP7B-215ENST00000634844 4398 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.753e-7■■■■□ 24.5
MATR3P43243 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.31■■□□□ 1.322e-6■■■■□ 24.5
MATR3P43243 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.042e-6■■■■□ 24.5
MATR3P43243 ANTXR2-201ENST00000307333 1473 ntTSL 1 (best) BASIC10.36□□□□□ -0.752e-6■■■■□ 24.5
MATR3P43243 ANTXR2-205ENST00000449651 2026 ntTSL 28.21□□□□□ -1.12e-6■■■■□ 24.5
MATR3P43243 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC7.49□□□□□ -1.212e-6■■■■□ 24.5
MATR3P43243 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.881e-7■■■■□ 24.5
MATR3P43243 NSMCE2-201ENST00000287437 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.544e-6■■■■□ 24.5
MATR3P43243 NSMCE2-203ENST00000517532 841 ntTSL 510.3□□□□□ -0.764e-6■■■■□ 24.5
MATR3P43243 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.35□□□□□ -1.394e-6■■■■□ 24.5
MATR3P43243 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.444e-6■■■■□ 24.5
MATR3P43243 ARIH1-206ENST00000564062 612 ntTSL 334.62■■■■□ 3.134e-6■■■■□ 24.5
MATR3P43243 ARIH1-210ENST00000570085 807 ntTSL 332.32■■■□□ 2.764e-6■■■■□ 24.5
MATR3P43243 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.6■■□□□ 1.534e-6■■■■□ 24.5
MATR3P43243 SLC35A3-211ENST00000638876 1005 ntTSL 523.78■■□□□ 1.44e-6■■■■□ 24.5
MATR3P43243 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.384e-6■■■■□ 24.5
MATR3P43243 SLC35A3-223ENST00000640726 1636 ntTSL 523.57■■□□□ 1.364e-6■■■■□ 24.5
MATR3P43243 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.42■■□□□ 1.344e-6■■■■□ 24.5
MATR3P43243 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.42■■□□□ 1.344e-6■■■■□ 24.5
MATR3P43243 SLC35A3-202ENST00000370155 2454 ntTSL 523.01■■□□□ 1.274e-6■■■■□ 24.5
MATR3P43243 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.254e-6■■■■□ 24.5
MATR3P43243 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.67■■□□□ 1.224e-6■■■■□ 24.5
MATR3P43243 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.25■■□□□ 1.154e-6■■■■□ 24.5
MATR3P43243 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.91■■□□□ 1.14e-6■■■■□ 24.5
MATR3P43243 SLC39A9-208ENST00000556125 944 ntTSL 321.75■■□□□ 1.074e-6■■■■□ 24.5
MATR3P43243 SLC35A3-214ENST00000639088 1451 ntTSL 521.71■■□□□ 1.074e-6■■■■□ 24.5
MATR3P43243 SLC35A3-219ENST00000640178 2446 ntTSL 521.57■■□□□ 1.044e-6■■■■□ 24.5
MATR3P43243 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.55■□□□□ 0.884e-6■■■■□ 24.5
MATR3P43243 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.42■□□□□ 0.864e-6■■■■□ 24.5
Retrieved 100 of 16,209 protein–RNA pairs in 85.1 ms