RNA–Protein interactions for RNA: ENST00000640178.1

SLC35A3-219, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5

Gene SLC35A3, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-219ENST00000640178 NISCHQ9Y2I1 1504 aa40.6■■■■■ 4.09
SLC35A3-219ENST00000640178 SHROOM4Q9ULL8 1493 aa34.69■■■■□ 3.14
SLC35A3-219ENST00000640178 CCDC180Q9P1Z9 1646 aa34.52■■■■□ 3.12
SLC35A3-219ENST00000640178 ZCCHC6Q5VYS8 1495 aaKnown RBP34.34■■■■□ 3.09
SLC35A3-219ENST00000640178 SUPT5HO00267 1087 aaKnown RBP33.99■■■■□ 3.03
SLC35A3-219ENST00000640178 DCAF8L2P0C7V8 631 aa33.77■■■■□ 3
SLC35A3-219ENST00000640178 DCAF1Q9Y4B6 1507 aa33.26■■■□□ 2.91
SLC35A3-219ENST00000640178 CHIC1Q5VXU3 224 aa32.98■■■□□ 2.87
SLC35A3-219ENST00000640178 MYO15BQ96JP2 1530 aa32.89■■■□□ 2.86
SLC35A3-219ENST00000640178 SCRIBQ14160 1630 aa32.43■■■□□ 2.78
SLC35A3-219ENST00000640178 ABCC9O60706 1549 aa32.41■■■□□ 2.78
SLC35A3-219ENST00000640178 RSF1Q96T23 1441 aaPredicted RBP32.13■■■□□ 2.73
SLC35A3-219ENST00000640178 LOC105371045A0A1W2PR82 267 aa32.05■■■□□ 2.72
SLC35A3-219ENST00000640178 PCGF6Q9BYE7 350 aa31.97■■■□□ 2.71
SLC35A3-219ENST00000640178 NACADO15069 1562 aa31.91■■■□□ 2.7
SLC35A3-219ENST00000640178 HRCP23327 699 aa31.9■■■□□ 2.7
SLC35A3-219ENST00000640178 RB1CC1Q8TDY2 1594 aa31.83■■■□□ 2.69
SLC35A3-219ENST00000640178 CECR2Q9BXF3 1484 aa31.71■■■□□ 2.67
SLC35A3-219ENST00000640178 TRIM41Q8WV44 630 aa31.63■■■□□ 2.65
SLC35A3-219ENST00000640178 MROH2BQ7Z745 1585 aa31.59■■■□□ 2.65
SLC35A3-219ENST00000640178 WIZO95785 1651 aa31.45■■■□□ 2.63
SLC35A3-219ENST00000640178 FAM9AQ8IZU1 332 aaPredicted RBP31.43■■■□□ 2.62
SLC35A3-219ENST00000640178 TRIM26Q12899 539 aaPredicted RBP31.32■■■□□ 2.6
SLC35A3-219ENST00000640178 PPARGC1BQ86YN6 1023 aaKnown RBP31.32■■■□□ 2.6
SLC35A3-219ENST00000640178 BAZ1AQ9NRL2 1556 aaPredicted RBP31.21■■■□□ 2.59
SLC35A3-219ENST00000640178 EHMT2Q96KQ7 1210 aa31.2■■■□□ 2.59
SLC35A3-219ENST00000640178 UNC13AQ9UPW8 1703 aa31.03■■■□□ 2.56
SLC35A3-219ENST00000640178 EIF4G1Q04637 1599 aaKnown RBP30.97■■■□□ 2.55
SLC35A3-219ENST00000640178 SMARCA4P51532 1647 aa30.95■■■□□ 2.54
SLC35A3-219ENST00000640178 TOP2AP11388 1531 aaKnown RBP30.91■■■□□ 2.54
SLC35A3-219ENST00000640178 CCDC88BA6NC98 1476 aa30.8■■■□□ 2.52
SLC35A3-219ENST00000640178 SMARCA2P51531 1590 aa30.76■■■□□ 2.51
SLC35A3-219ENST00000640178 ABCC8Q09428 1581 aa30.75■■■□□ 2.51
SLC35A3-219ENST00000640178 PABPN1Q86U42 306 aaKnown RBP eCLIP30.69■■■□□ 2.5
SLC35A3-219ENST00000640178 BICRAQ9NZM4 1560 aa30.6■■■□□ 2.49
SLC35A3-219ENST00000640178 ZEB1P37275 1124 aaPredicted RBP30.57■■■□□ 2.48
SLC35A3-219ENST00000640178 SOGA1O94964 1423 aa30.43■■■□□ 2.46
SLC35A3-219ENST00000640178 PEG3Q9GZU2 1588 aa30.31■■■□□ 2.44
SLC35A3-219ENST00000640178 RUSC2Q8N2Y8 1516 aa30.3■■■□□ 2.44
SLC35A3-219ENST00000640178 CEP162Q5TB80 1403 aa30.26■■■□□ 2.44
SLC35A3-219ENST00000640178 CSRNP3Q8WYN3 585 aa30.23■■■□□ 2.43
SLC35A3-219ENST00000640178 EEA1Q15075 1411 aa30.19■■■□□ 2.42
SLC35A3-219ENST00000640178 TTBK1Q5TCY1 1321 aaPredicted RBP30.18■■■□□ 2.42
SLC35A3-219ENST00000640178 TNIKQ9UKE5 1360 aa30.18■■■□□ 2.42
SLC35A3-219ENST00000640178 WRNQ14191 1432 aaPredicted RBP eCLIP30.18■■■□□ 2.42
SLC35A3-219ENST00000640178 UBTFP17480 764 aaKnown RBP30.15■■■□□ 2.42
SLC35A3-219ENST00000640178 ATAD2BQ9ULI0 1458 aa30.15■■■□□ 2.42
SLC35A3-219ENST00000640178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.14■■■□□ 2.42
SLC35A3-219ENST00000640178 BAZ1BQ9UIG0 1483 aaKnown RBP30.08■■■□□ 2.41
SLC35A3-219ENST00000640178 SYNJ1O43426 1573 aa30.07■■■□□ 2.4
SLC35A3-219ENST00000640178 GOLGA3Q08378 1498 aa30.04■■■□□ 2.4
SLC35A3-219ENST00000640178 CCER1Q8TC90 406 aaPredicted RBP30.03■■■□□ 2.4
SLC35A3-219ENST00000640178 CEP164Q9UPV0 1460 aa29.86■■■□□ 2.37
SLC35A3-219ENST00000640178 KIF21BO75037 1637 aa29.83■■■□□ 2.37
SLC35A3-219ENST00000640178 CLIP1P30622 1438 aa29.71■■■□□ 2.35
SLC35A3-219ENST00000640178 RAPGEF2Q9Y4G8 1499 aa29.69■■■□□ 2.34
SLC35A3-219ENST00000640178 TOP2BQ02880 1626 aa29.67■■■□□ 2.34
SLC35A3-219ENST00000640178 RANGAP1P46060 587 aaPredicted RBP29.62■■■□□ 2.33
SLC35A3-219ENST00000640178 BIVM-ERCC5R4GMW8 1640 aa29.57■■■□□ 2.32
SLC35A3-219ENST00000640178 VPS8Q8N3P4 1428 aa29.56■■■□□ 2.32
SLC35A3-219ENST00000640178 HMGXB3Q12766 1538 aa29.54■■■□□ 2.32
SLC35A3-219ENST00000640178 NCAPD3P42695 1498 aa29.53■■■□□ 2.32
SLC35A3-219ENST00000640178 HNRNPUL2Q1KMD3 747 aaKnown RBP29.47■■■□□ 2.31
SLC35A3-219ENST00000640178 APLP2Q06481 763 aa29.44■■■□□ 2.3
SLC35A3-219ENST00000640178 CUX1P39880 1505 aa29.41■■■□□ 2.3
SLC35A3-219ENST00000640178 DIEXFQ68CQ4 756 aaKnown RBP29.4■■■□□ 2.3
SLC35A3-219ENST00000640178 SCAF1Q9H7N4 1312 aaKnown RBP29.38■■■□□ 2.29
SLC35A3-219ENST00000640178 PRXQ9BXM0 1461 aa29.36■■■□□ 2.29
SLC35A3-219ENST00000640178 ERICH3Q5RHP9 1530 aa29.34■■■□□ 2.29
SLC35A3-219ENST00000640178 CFTRP13569 1480 aa29.31■■■□□ 2.28
SLC35A3-219ENST00000640178 KIF27Q86VH2 1401 aa29.25■■■□□ 2.27
SLC35A3-219ENST00000640178 ARAP1Q96P48 1450 aa29.24■■■□□ 2.27
SLC35A3-219ENST00000640178 ZNF316A6NFI3 1004 aaPredicted RBP29.18■■■□□ 2.26
SLC35A3-219ENST00000640178 ACIN1Q9UKV3 1341 aaKnown RBP29.11■■■□□ 2.25
SLC35A3-219ENST00000640178 NEUROD1Q13562 356 aa29.11■■■□□ 2.25
SLC35A3-219ENST00000640178 KANK4Q5T7N3 995 aaPredicted RBP29.1■■■□□ 2.25
SLC35A3-219ENST00000640178 PRDM2Q13029 1718 aa29.1■■■□□ 2.25
SLC35A3-219ENST00000640178 CUX2O14529 1486 aa29.01■■■□□ 2.23
SLC35A3-219ENST00000640178 CADPSQ9ULU8 1353 aa28.99■■■□□ 2.23
SLC35A3-219ENST00000640178 ARHGAP35Q9NRY4 1499 aa28.99■■■□□ 2.23
SLC35A3-219ENST00000640178 CENPBP07199 599 aaPredicted RBP28.94■■■□□ 2.22
SLC35A3-219ENST00000640178 IGF1RP08069 1367 aa28.94■■■□□ 2.22
SLC35A3-219ENST00000640178 FGD5Q6ZNL6 1462 aa28.9■■■□□ 2.22
SLC35A3-219ENST00000640178 CC2D2AQ9P2K1 1620 aa28.86■■■□□ 2.21
SLC35A3-219ENST00000640178 RRBP1Q9P2E9 1410 aaKnown RBP28.85■■■□□ 2.21
SLC35A3-219ENST00000640178 DHX57Q6P158 1386 aaKnown RBP28.85■■■□□ 2.21
SLC35A3-219ENST00000640178 CARMIL1Q5VZK9 1371 aa28.82■■■□□ 2.2
SLC35A3-219ENST00000640178 GTF3C3Q9Y5Q9 886 aa28.8■■■□□ 2.2
SLC35A3-219ENST00000640178 MIER1Q8N108 512 aa28.79■■■□□ 2.2
SLC35A3-219ENST00000640178 YTHDC1Q96MU7 727 aaKnown RBP28.77■■■□□ 2.2
SLC35A3-219ENST00000640178 CCNB3Q8WWL7 1395 aa28.75■■■□□ 2.19
SLC35A3-219ENST00000640178 CLSPNQ9HAW4 1339 aa28.74■■■□□ 2.19
SLC35A3-219ENST00000640178 FANCD2Q9BXW9 1451 aa28.74■■■□□ 2.19
SLC35A3-219ENST00000640178 ITGAEP38570 1179 aa28.73■■■□□ 2.19
SLC35A3-219ENST00000640178 TIAM1Q13009 1591 aa28.67■■■□□ 2.18
SLC35A3-219ENST00000640178 RAD54L2Q9Y4B4 1467 aa28.63■■■□□ 2.17
SLC35A3-219ENST00000640178 P3H3Q8IVL6 736 aa28.62■■■□□ 2.17
SLC35A3-219ENST00000640178 NESP48681 1621 aa28.59■■■□□ 2.17
SLC35A3-219ENST00000640178 DNMBPQ6XZF7 1577 aa28.59■■■□□ 2.17
SLC35A3-219ENST00000640178 MAP3K1Q13233 1512 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms