Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
BCKDHAP12694 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.58■□□□□ 0.89
BCKDHAP12694 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.58■□□□□ 0.89
BCKDHAP12694 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.58■□□□□ 0.89
BCKDHAP12694 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BCKDHAP12694 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BCKDHAP12694 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
BCKDHAP12694 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BCKDHAP12694 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.57■□□□□ 0.88
BCKDHAP12694 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.57■□□□□ 0.88
BCKDHAP12694 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
BCKDHAP12694 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.57■□□□□ 0.88
BCKDHAP12694 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.57■□□□□ 0.88
BCKDHAP12694 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BCKDHAP12694 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BCKDHAP12694 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BCKDHAP12694 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BCKDHAP12694 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BCKDHAP12694 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BCKDHAP12694 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BCKDHAP12694 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
BCKDHAP12694 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.56■□□□□ 0.88
BCKDHAP12694 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BCKDHAP12694 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BCKDHAP12694 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BCKDHAP12694 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.56■□□□□ 0.88
BCKDHAP12694 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.56■□□□□ 0.88
BCKDHAP12694 AC010141.3-201ENST00000456659 717 ntBASIC20.56■□□□□ 0.88
BCKDHAP12694 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.56■□□□□ 0.88
BCKDHAP12694 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BCKDHAP12694 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.56■□□□□ 0.88
BCKDHAP12694 MIR4466-201ENST00000606121 54 ntBASIC20.56■□□□□ 0.88
BCKDHAP12694 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.56■□□□□ 0.88
BCKDHAP12694 AC087239.1-201ENST00000622671 572 ntBASIC20.56■□□□□ 0.88
BCKDHAP12694 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.56■□□□□ 0.88
BCKDHAP12694 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
BCKDHAP12694 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
BCKDHAP12694 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.56■□□□□ 0.88
BCKDHAP12694 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BCKDHAP12694 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDHAP12694 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDHAP12694 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
BCKDHAP12694 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
BCKDHAP12694 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDHAP12694 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDHAP12694 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.55■□□□□ 0.88
BCKDHAP12694 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDHAP12694 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.55■□□□□ 0.88
BCKDHAP12694 SERBP1P1-201ENST00000396021 1160 ntBASIC20.55■□□□□ 0.88
BCKDHAP12694 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.55■□□□□ 0.88
BCKDHAP12694 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDHAP12694 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.55■□□□□ 0.88
BCKDHAP12694 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.55■□□□□ 0.88
BCKDHAP12694 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDHAP12694 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDHAP12694 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.55■□□□□ 0.88
BCKDHAP12694 Z98882.1-201ENST00000622160 2253 ntBASIC20.55■□□□□ 0.88
BCKDHAP12694 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BCKDHAP12694 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BCKDHAP12694 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
BCKDHAP12694 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.54■□□□□ 0.88
BCKDHAP12694 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BCKDHAP12694 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BCKDHAP12694 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BCKDHAP12694 AC005229.4-201ENST00000610085 2198 ntBASIC20.54■□□□□ 0.88
BCKDHAP12694 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BCKDHAP12694 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BCKDHAP12694 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.54■□□□□ 0.88
BCKDHAP12694 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BCKDHAP12694 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BCKDHAP12694 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BCKDHAP12694 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
BCKDHAP12694 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BCKDHAP12694 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
BCKDHAP12694 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.54■□□□□ 0.88
BCKDHAP12694 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BCKDHAP12694 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.53■□□□□ 0.88
BCKDHAP12694 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.53■□□□□ 0.88
BCKDHAP12694 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.53■□□□□ 0.88
BCKDHAP12694 AL138724.1-201ENST00000606771 1088 ntBASIC20.53■□□□□ 0.88
BCKDHAP12694 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BCKDHAP12694 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
BCKDHAP12694 SYT6-210ENST00000641643 1587 ntBASIC20.53■□□□□ 0.88
BCKDHAP12694 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BCKDHAP12694 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BCKDHAP12694 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BCKDHAP12694 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BCKDHAP12694 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BCKDHAP12694 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.53■□□□□ 0.88
BCKDHAP12694 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BCKDHAP12694 PKD1P6-201ENST00000343738 4769 ntBASIC20.53■□□□□ 0.88
BCKDHAP12694 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BCKDHAP12694 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.52■□□□□ 0.88
BCKDHAP12694 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BCKDHAP12694 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BCKDHAP12694 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BCKDHAP12694 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BCKDHAP12694 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BCKDHAP12694 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BCKDHAP12694 OXCT2P1-201ENST00000447263 1535 ntBASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms