Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSNA1O43805 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.32■□□□□ 0.52
SSNA1O43805 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSNA1O43805 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSNA1O43805 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SSNA1O43805 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSNA1O43805 AL162393.1-201ENST00000437852 946 ntBASIC18.32■□□□□ 0.52
SSNA1O43805 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.32■□□□□ 0.52
SSNA1O43805 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.32■□□□□ 0.52
SSNA1O43805 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.32■□□□□ 0.52
SSNA1O43805 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.32■□□□□ 0.52
SSNA1O43805 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSNA1O43805 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSNA1O43805 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSNA1O43805 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSNA1O43805 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.31■□□□□ 0.52
SSNA1O43805 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSNA1O43805 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
SSNA1O43805 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.31■□□□□ 0.52
SSNA1O43805 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.31■□□□□ 0.52
SSNA1O43805 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.31■□□□□ 0.52
SSNA1O43805 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SSNA1O43805 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.31■□□□□ 0.52
SSNA1O43805 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.31■□□□□ 0.52
SSNA1O43805 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSNA1O43805 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSNA1O43805 AC093536.1-201ENST00000569153 554 ntBASIC18.31■□□□□ 0.52
SSNA1O43805 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SSNA1O43805 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.31■□□□□ 0.52
SSNA1O43805 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SSNA1O43805 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSNA1O43805 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSNA1O43805 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSNA1O43805 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSNA1O43805 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSNA1O43805 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSNA1O43805 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.31■□□□□ 0.52
SSNA1O43805 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSNA1O43805 HCG11-201ENST00000411553 5696 ntBASIC18.31■□□□□ 0.52
SSNA1O43805 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SSNA1O43805 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SSNA1O43805 AC144652.1-201ENST00000609974 1624 ntBASIC18.31■□□□□ 0.52
SSNA1O43805 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSNA1O43805 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.3■□□□□ 0.52
SSNA1O43805 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
SSNA1O43805 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.3■□□□□ 0.52
SSNA1O43805 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.3■□□□□ 0.52
SSNA1O43805 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSNA1O43805 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.3■□□□□ 0.52
SSNA1O43805 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSNA1O43805 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SSNA1O43805 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSNA1O43805 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.3■□□□□ 0.52
SSNA1O43805 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.3■□□□□ 0.52
SSNA1O43805 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSNA1O43805 AC131274.2-201ENST00000580697 1507 ntBASIC18.29■□□□□ 0.52
SSNA1O43805 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.29■□□□□ 0.52
SSNA1O43805 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.29■□□□□ 0.52
SSNA1O43805 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.29■□□□□ 0.52
SSNA1O43805 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.29■□□□□ 0.52
SSNA1O43805 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSNA1O43805 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.29■□□□□ 0.52
SSNA1O43805 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSNA1O43805 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.29■□□□□ 0.52
SSNA1O43805 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSNA1O43805 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSNA1O43805 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSNA1O43805 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSNA1O43805 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSNA1O43805 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.29■□□□□ 0.52
SSNA1O43805 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.29■□□□□ 0.52
SSNA1O43805 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSNA1O43805 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
SSNA1O43805 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
SSNA1O43805 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.28■□□□□ 0.52
SSNA1O43805 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSNA1O43805 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.28■□□□□ 0.52
SSNA1O43805 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSNA1O43805 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.28■□□□□ 0.52
SSNA1O43805 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSNA1O43805 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSNA1O43805 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSNA1O43805 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.28■□□□□ 0.52
SSNA1O43805 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SSNA1O43805 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSNA1O43805 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.28■□□□□ 0.52
SSNA1O43805 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSNA1O43805 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSNA1O43805 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
SSNA1O43805 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SSNA1O43805 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSNA1O43805 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SSNA1O43805 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SSNA1O43805 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSNA1O43805 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SSNA1O43805 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SSNA1O43805 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSNA1O43805 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSNA1O43805 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSNA1O43805 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms