Protein–RNA interactions for Protein: O15068

MCF2L, Guanine nucleotide exchange factor DBS, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2LO15068 NFXL1-202ENST00000381538 3728 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
MCF2LO15068 TUBE1-202ENST00000368662 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MCF2LO15068 FNBP4-201ENST00000263773 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MCF2LO15068 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MCF2LO15068 RHBDL2-202ENST00000372990 1837 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
MCF2LO15068 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC12.7□□□□□ -0.38
MCF2LO15068 CEP89-201ENST00000305768 5678 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
MCF2LO15068 TMPRSS13-205ENST00000526090 2592 ntTSL 2 BASIC12.7□□□□□ -0.38
MCF2LO15068 MAN2C1-224ENST00000565683 3300 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MCF2LO15068 AP000350.6-201ENST00000609510 5637 ntBASIC12.7□□□□□ -0.38
MCF2LO15068 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
MCF2LO15068 HIST1H1C-201ENST00000343677 642 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
MCF2LO15068 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MCF2LO15068 RN7SKP90-201ENST00000363013 335 ntBASIC12.7□□□□□ -0.38
MCF2LO15068 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC12.7□□□□□ -0.38
MCF2LO15068 MIR766-201ENST00000390223 111 ntBASIC12.7□□□□□ -0.38
MCF2LO15068 BX088651.3-201ENST00000418155 352 ntBASIC12.7□□□□□ -0.38
MCF2LO15068 AC006022.1-201ENST00000425261 388 ntBASIC12.7□□□□□ -0.38
MCF2LO15068 HTR3D-203ENST00000428798 1215 ntTSL 5 BASIC12.7□□□□□ -0.38
MCF2LO15068 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC12.7□□□□□ -0.38
MCF2LO15068 AC005324.2-201ENST00000433051 415 ntTSL 5 BASIC12.7□□□□□ -0.38
MCF2LO15068 LINC01366-201ENST00000436248 983 ntTSL 3 BASIC12.7□□□□□ -0.38
MCF2LO15068 HTR3D-204ENST00000453435 1043 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MCF2LO15068 RN7SL173P-201ENST00000461853 292 ntBASIC12.7□□□□□ -0.38
MCF2LO15068 AC020917.1-201ENST00000494084 893 ntBASIC12.7□□□□□ -0.38
MCF2LO15068 AC110753.1-201ENST00000505711 1022 ntBASIC12.7□□□□□ -0.38
MCF2LO15068 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC12.7□□□□□ -0.38
MCF2LO15068 ZNF503-AS1-202ENST00000524517 790 ntTSL 3 BASIC12.7□□□□□ -0.38
MCF2LO15068 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC12.7□□□□□ -0.38
MCF2LO15068 AC106782.3-201ENST00000563429 258 ntBASIC12.7□□□□□ -0.38
MCF2LO15068 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC12.7□□□□□ -0.38
MCF2LO15068 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC12.7□□□□□ -0.38
MCF2LO15068 MIR3183-201ENST00000578566 84 ntBASIC12.7□□□□□ -0.38
MCF2LO15068 AC020663.2-201ENST00000592465 720 ntTSL 3 BASIC12.7□□□□□ -0.38
MCF2LO15068 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC12.7□□□□□ -0.38
MCF2LO15068 AP000892.2-201ENST00000613535 324 ntBASIC12.7□□□□□ -0.38
MCF2LO15068 AC004233.4-201ENST00000621689 417 ntBASIC12.7□□□□□ -0.38
MCF2LO15068 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC12.7□□□□□ -0.38
MCF2LO15068 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC12.7□□□□□ -0.38
MCF2LO15068 AC109635.4-201ENST00000636653 1005 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MCF2LO15068 IFT80-201ENST00000326448 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MCF2LO15068 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
MCF2LO15068 FAM9A-201ENST00000381003 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MCF2LO15068 SERTAD3-202ENST00000392028 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MCF2LO15068 PMEL-218ENST00000552882 2516 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
MCF2LO15068 CLIP3-201ENST00000360535 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MCF2LO15068 ZNF442-203ENST00000438182 1906 ntTSL 2 BASIC12.7□□□□□ -0.38
MCF2LO15068 AC004847.1-201ENST00000568457 1911 ntBASIC12.7□□□□□ -0.38
MCF2LO15068 EPHB4-202ENST00000360620 3789 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MCF2LO15068 PIGN-214ENST00000589720 1853 ntTSL 2 BASIC12.7□□□□□ -0.38
MCF2LO15068 LOX-201ENST00000231004 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MCF2LO15068 RECQL5-201ENST00000317905 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MCF2LO15068 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MCF2LO15068 LIN54-206ENST00000506560 2757 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MCF2LO15068 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC12.69□□□□□ -0.38
MCF2LO15068 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
MCF2LO15068 GP6-203ENST00000417454 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
MCF2LO15068 BANK1-201ENST00000322953 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MCF2LO15068 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MCF2LO15068 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
MCF2LO15068 CICP26-201ENST00000425003 2448 ntBASIC12.69□□□□□ -0.38
MCF2LO15068 DPY19L2P2-204ENST00000438364 3947 ntTSL 2 BASIC12.69□□□□□ -0.38
MCF2LO15068 EBNA1BP2-202ENST00000431635 1503 ntTSL 2 BASIC12.69□□□□□ -0.38
MCF2LO15068 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MCF2LO15068 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MCF2LO15068 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC12.69□□□□□ -0.38
MCF2LO15068 MS4A13-202ENST00000378186 928 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MCF2LO15068 TRAV38-2DV8-201ENST00000390465 395 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
MCF2LO15068 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC12.69□□□□□ -0.38
MCF2LO15068 WDR54-202ENST00000409791 854 ntTSL 3 BASIC12.69□□□□□ -0.38
MCF2LO15068 SKA1-203ENST00000417656 1095 ntTSL 2 BASIC12.69□□□□□ -0.38
MCF2LO15068 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
MCF2LO15068 HNRNPA1P9-201ENST00000450624 950 ntBASIC12.69□□□□□ -0.38
MCF2LO15068 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MCF2LO15068 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MCF2LO15068 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC12.69□□□□□ -0.38
MCF2LO15068 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
MCF2LO15068 AP003469.2-201ENST00000524369 430 ntTSL 3 BASIC12.69□□□□□ -0.38
MCF2LO15068 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC12.69□□□□□ -0.38
MCF2LO15068 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC12.69□□□□□ -0.38
MCF2LO15068 PMEL-214ENST00000550447 901 ntTSL 3 BASIC12.69□□□□□ -0.38
MCF2LO15068 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC12.69□□□□□ -0.38
MCF2LO15068 AL133297.2-201ENST00000563162 485 ntTSL 2 BASIC12.69□□□□□ -0.38
MCF2LO15068 LINC00868-203ENST00000592919 853 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MCF2LO15068 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
MCF2LO15068 LINC00963-216ENST00000623185 786 ntTSL 5 BASIC12.69□□□□□ -0.38
MCF2LO15068 AC010201.2-201ENST00000605595 1495 ntBASIC12.69□□□□□ -0.38
MCF2LO15068 GOLGA8CP-201ENST00000446144 5237 ntBASIC12.69□□□□□ -0.38
MCF2LO15068 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
MCF2LO15068 SEMA3F-206ENST00000434342 3541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
MCF2LO15068 ACVRL1-206ENST00000550683 4121 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MCF2LO15068 MIS12-206ENST00000611091 2691 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
MCF2LO15068 LINC02210-CRHR1-202ENST00000634540 2695 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
MCF2LO15068 AC105219.4-201ENST00000529743 1809 ntTSL 3 BASIC12.69□□□□□ -0.38
MCF2LO15068 SLC10A1-201ENST00000216540 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MCF2LO15068 IL17RB-201ENST00000288167 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MCF2LO15068 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
MCF2LO15068 LAMB1-204ENST00000393561 5766 ntTSL 5 BASIC12.69□□□□□ -0.38
MCF2LO15068 ITGB1-202ENST00000396033 3784 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
MCF2LO15068 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms