Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MDH2-201ENST00000315758 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC12.73□□□□□ -0.37
SLC1A1P43005 FOSB-202ENST00000417353 3667 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC12.73□□□□□ -0.37
SLC1A1P43005 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SLC1A1P43005 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
SLC1A1P43005 ARHGAP6-201ENST00000303025 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 GNLY-201ENST00000263863 846 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC12.73□□□□□ -0.37
SLC1A1P43005 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SLC1A1P43005 RPSAP61-201ENST00000412542 878 ntBASIC12.73□□□□□ -0.37
SLC1A1P43005 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC12.73□□□□□ -0.37
SLC1A1P43005 HOTAIRM1-202ENST00000428939 889 ntTSL 2 BASIC12.73□□□□□ -0.37
SLC1A1P43005 AC007041.1-201ENST00000438989 1155 ntBASIC12.73□□□□□ -0.37
SLC1A1P43005 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC12.73□□□□□ -0.37
SLC1A1P43005 ZNF7-209ENST00000529819 513 ntTSL 4 BASIC12.73□□□□□ -0.37
SLC1A1P43005 AC023078.7-201ENST00000532712 961 ntBASIC12.73□□□□□ -0.37
SLC1A1P43005 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC12.73□□□□□ -0.37
SLC1A1P43005 ZNF37A-206ENST00000638053 4448 ntTSL 5 BASIC12.73□□□□□ -0.37
SLC1A1P43005 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 PAK3-206ENST00000425146 2477 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
SLC1A1P43005 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 LTF-201ENST00000231751 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 TMEM107-208ENST00000532998 2358 ntTSL 2 BASIC12.73□□□□□ -0.37
SLC1A1P43005 AL021392.1-201ENST00000426112 2949 ntTSL 2 BASIC12.73□□□□□ -0.37
SLC1A1P43005 CELF4-203ENST00000420428 4052 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
SLC1A1P43005 HFE-204ENST00000349999 1704 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 ZNF423-204ENST00000562520 4018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 STAT3-213ENST00000588969 2772 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC1A1P43005 KLK2-203ENST00000391810 2674 ntTSL 2 BASIC12.73□□□□□ -0.37
SLC1A1P43005 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
SLC1A1P43005 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 AC016355.1-201ENST00000604760 1533 ntBASIC12.72□□□□□ -0.37
SLC1A1P43005 ATP6V1G2-DDX39B-201ENST00000376185 2039 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SLC1A1P43005 MS4A14-209ENST00000531787 2537 ntTSL 2 BASIC12.72□□□□□ -0.37
SLC1A1P43005 AC091198.1-201ENST00000591558 2492 ntTSL 5 BASIC12.72□□□□□ -0.37
SLC1A1P43005 RSPH3-203ENST00000449822 1904 ntTSL 2 BASIC12.72□□□□□ -0.37
SLC1A1P43005 FLT3-201ENST00000241453 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 TMLHE-201ENST00000334398 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 ZNF619-209ENST00000521353 1869 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
SLC1A1P43005 DPY19L2P3-201ENST00000414296 2326 ntBASIC12.72□□□□□ -0.37
SLC1A1P43005 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
SLC1A1P43005 PLEKHG5-208ENST00000400915 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 USF1-203ENST00000368021 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 BAG6-235ENST00000362049 3626 ntTSL 2 BASIC12.72□□□□□ -0.37
SLC1A1P43005 ATP8B3-202ENST00000525591 4014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC12.72□□□□□ -0.37
SLC1A1P43005 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 RIPOR1-205ENST00000540839 4260 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SLC1A1P43005 SNAPC5-203ENST00000395589 749 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
SLC1A1P43005 AL157823.1-201ENST00000403727 628 ntBASIC12.72□□□□□ -0.37
SLC1A1P43005 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 FAM45BP-201ENST00000408950 1074 ntBASIC12.72□□□□□ -0.37
SLC1A1P43005 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC12.72□□□□□ -0.37
SLC1A1P43005 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC12.72□□□□□ -0.37
SLC1A1P43005 AP002383.2-201ENST00000545768 675 ntBASIC12.72□□□□□ -0.37
SLC1A1P43005 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC12.72□□□□□ -0.37
SLC1A1P43005 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC12.72□□□□□ -0.37
SLC1A1P43005 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC12.72□□□□□ -0.37
SLC1A1P43005 AC131274.3-201ENST00000578745 1271 ntBASIC12.72□□□□□ -0.37
SLC1A1P43005 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC12.72□□□□□ -0.37
SLC1A1P43005 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC12.72□□□□□ -0.37
SLC1A1P43005 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC12.72□□□□□ -0.37
SLC1A1P43005 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 CTSK-201ENST00000271651 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 EFL1-201ENST00000268206 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 PTPRR-209ENST00000549308 1603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 GNL3-202ENST00000418458 2040 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 MIR646HG-207ENST00000432910 2043 ntTSL 2 BASIC12.72□□□□□ -0.37
SLC1A1P43005 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SLC1A1P43005 CD99L2-203ENST00000370377 3604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SLC1A1P43005 TFIP11-204ENST00000407690 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC12.72□□□□□ -0.37
SLC1A1P43005 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 AP5S1-205ENST00000615891 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 COL8A1-201ENST00000261037 5705 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 TCN2-203ENST00000407817 1870 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SLC1A1P43005 AC012184.3-201ENST00000562077 1471 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SLC1A1P43005 GABRR1-201ENST00000369451 1823 ntTSL 5 BASIC12.72□□□□□ -0.37
SLC1A1P43005 MRVI1-209ENST00000531107 2887 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
SLC1A1P43005 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SLC1A1P43005 CA3-201ENST00000285381 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SLC1A1P43005 ADGRE5-203ENST00000358600 2751 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SLC1A1P43005 COLQ-201ENST00000383781 2784 ntTSL 5 BASIC12.71□□□□□ -0.37
SLC1A1P43005 AC092135.1-201ENST00000623398 2059 ntBASIC12.71□□□□□ -0.37
SLC1A1P43005 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SLC1A1P43005 FGF11-202ENST00000572907 2358 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SLC1A1P43005 AC079880.1-201ENST00000603040 2046 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms