RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 PELP1Q8IZL8 1130 aaKnown RBP20.07■□□□□ 0.8
SRRM4-201ENST00000267260 DCAF8L2P0C7V8 631 aa19.66■□□□□ 0.74
SRRM4-201ENST00000267260 MYT1Q01538 1121 aa19.26■□□□□ 0.67
SRRM4-201ENST00000267260 ERICH6Q7L0X2 663 aa19.16■□□□□ 0.66
SRRM4-201ENST00000267260 CCER1Q8TC90 406 aaPredicted RBP19.09■□□□□ 0.65
SRRM4-201ENST00000267260 SUPT5HO00267 1087 aaKnown RBP18.77■□□□□ 0.59
SRRM4-201ENST00000267260 CENPBP07199 599 aaPredicted RBP18.72■□□□□ 0.59
SRRM4-201ENST00000267260 APLP2Q06481 763 aa18.72■□□□□ 0.59
SRRM4-201ENST00000267260 FAM9AQ8IZU1 332 aaPredicted RBP18.61■□□□□ 0.57
SRRM4-201ENST00000267260 YTHDC1Q96MU7 727 aaKnown RBP18.43■□□□□ 0.54
SRRM4-201ENST00000267260 NEFLP07196 543 aa18.37■□□□□ 0.53
SRRM4-201ENST00000267260 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
SRRM4-201ENST00000267260 EHMT2Q96KQ7 1210 aa18.3■□□□□ 0.52
SRRM4-201ENST00000267260 TTBK1Q5TCY1 1321 aaPredicted RBP18.2■□□□□ 0.5
SRRM4-201ENST00000267260 SHROOM4Q9ULL8 1493 aa18.19■□□□□ 0.5
SRRM4-201ENST00000267260 DAXXQ9UER7 740 aaPredicted RBP18.15■□□□□ 0.5
SRRM4-201ENST00000267260 NISCHQ9Y2I1 1504 aa18.13■□□□□ 0.49
SRRM4-201ENST00000267260 PCGF6Q9BYE7 350 aa18.05■□□□□ 0.48
SRRM4-201ENST00000267260 RTL5Q5HYW3 569 aaPredicted RBP17.78■□□□□ 0.44
SRRM4-201ENST00000267260 ATP1B4Q9UN42 357 aaPredicted RBP17.68■□□□□ 0.42
SRRM4-201ENST00000267260 ZNF316A6NFI3 1004 aaPredicted RBP17.66■□□□□ 0.42
SRRM4-201ENST00000267260 TRIM41Q8WV44 630 aa17.54■□□□□ 0.4
SRRM4-201ENST00000267260 RANGAP1P46060 587 aaPredicted RBP17.53■□□□□ 0.4
SRRM4-201ENST00000267260 UBTFP17480 764 aaKnown RBP17.51■□□□□ 0.39
SRRM4-201ENST00000267260 CLSPNQ9HAW4 1339 aa17.36■□□□□ 0.37
SRRM4-201ENST00000267260 TRIM26Q12899 539 aaPredicted RBP17.31■□□□□ 0.36
SRRM4-201ENST00000267260 GLIPR1L2Q4G1C9 344 aa17.25■□□□□ 0.35
SRRM4-201ENST00000267260 POLR3GLQ9BT43 218 aa17.2■□□□□ 0.34
SRRM4-201ENST00000267260 HRCP23327 699 aa17.19■□□□□ 0.34
SRRM4-201ENST00000267260 MYT1LQ9UL68 1186 aa17.14■□□□□ 0.33
SRRM4-201ENST00000267260 SLC4A1APQ9BWU0 796 aaKnown RBP17.05■□□□□ 0.32
SRRM4-201ENST00000267260 ZBTB47Q9UFB7 747 aaPredicted RBP17.05■□□□□ 0.32
SRRM4-201ENST00000267260 CDK11AQ9UQ88 783 aaPredicted RBP17.04■□□□□ 0.32
SRRM4-201ENST00000267260 EIF5BO60841 1220 aaKnown RBP17.02■□□□□ 0.32
SRRM4-201ENST00000267260 ANP32BQ92688 251 aaKnown RBP16.97■□□□□ 0.31
SRRM4-201ENST00000267260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.94■□□□□ 0.3
SRRM4-201ENST00000267260 HNRNPUL2Q1KMD3 747 aaKnown RBP16.94■□□□□ 0.3
SRRM4-201ENST00000267260 ITGAEP38570 1179 aa16.94■□□□□ 0.3
SRRM4-201ENST00000267260 DIEXFQ68CQ4 756 aaKnown RBP16.93■□□□□ 0.3
SRRM4-201ENST00000267260 PPARGC1BQ86YN6 1023 aaKnown RBP16.9■□□□□ 0.3
SRRM4-201ENST00000267260 CNGB1Q14028 1251 aaPredicted RBP16.89■□□□□ 0.29
SRRM4-201ENST00000267260 ANP32AP39687 249 aaKnown RBP16.88■□□□□ 0.29
SRRM4-201ENST00000267260 GTF3C3Q9Y5Q9 886 aa16.79■□□□□ 0.28
SRRM4-201ENST00000267260 BCANQ96GW7 911 aa16.76■□□□□ 0.27
SRRM4-201ENST00000267260 ANP32CO43423 234 aa16.74■□□□□ 0.27
SRRM4-201ENST00000267260 CHIC1Q5VXU3 224 aa16.73■□□□□ 0.27
SRRM4-201ENST00000267260 CANXP27824 592 aaKnown RBP16.72■□□□□ 0.27
SRRM4-201ENST00000267260 NEFMP07197 916 aa16.69■□□□□ 0.26
SRRM4-201ENST00000267260 HSP90AA1P07900 732 aaKnown RBP16.61■□□□□ 0.25
SRRM4-201ENST00000267260 TNNT2P45379 298 aaPredicted RBP16.57■□□□□ 0.24
SRRM4-201ENST00000267260 FAM50AQ14320 339 aaKnown RBP16.57■□□□□ 0.24
SRRM4-201ENST00000267260 UPF2Q9HAU5 1272 aaKnown RBP16.57■□□□□ 0.24
SRRM4-201ENST00000267260 SLC24A1O60721 1099 aa16.55■□□□□ 0.24
SRRM4-201ENST00000267260 TRIM52Q96A61 297 aa16.54■□□□□ 0.24
SRRM4-201ENST00000267260 NPM2Q86SE8 214 aaKnown RBP16.53■□□□□ 0.24
SRRM4-201ENST00000267260 BCL11AQ9H165 835 aa16.48■□□□□ 0.23
SRRM4-201ENST00000267260 NEUROD1Q13562 356 aa16.46■□□□□ 0.23
SRRM4-201ENST00000267260 ACIN1Q9UKV3 1341 aaKnown RBP16.41■□□□□ 0.22
SRRM4-201ENST00000267260 CDK11BP21127 795 aaKnown RBP16.41■□□□□ 0.22
SRRM4-201ENST00000267260 LOC105371045A0A1W2PR82 267 aa16.4■□□□□ 0.22
SRRM4-201ENST00000267260 NBR1Q14596 966 aa16.35■□□□□ 0.21
SRRM4-201ENST00000267260 ZNF326Q5BKZ1 582 aaKnown RBP16.34■□□□□ 0.21
SRRM4-201ENST00000267260 TRIM44Q96DX7 344 aaPredicted RBP16.3■□□□□ 0.2
SRRM4-201ENST00000267260 ANP32EQ9BTT0 268 aa16.27■□□□□ 0.19
SRRM4-201ENST00000267260 ARXQ96QS3 562 aa16.26■□□□□ 0.19
SRRM4-201ENST00000267260 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.23■□□□□ 0.19
SRRM4-201ENST00000267260 FKBP8Q14318 412 aa16.21■□□□□ 0.19
SRRM4-201ENST00000267260 NCLP19338 710 aaKnown RBP16.12■□□□□ 0.17
SRRM4-201ENST00000267260 DDRGK1Q96HY6 314 aa16.12■□□□□ 0.17
SRRM4-201ENST00000267260 BECN1Q14457 450 aa16.12■□□□□ 0.17
SRRM4-201ENST00000267260 ERICH6BQ5W0A0 696 aa16.12■□□□□ 0.17
SRRM4-201ENST00000267260 MYH16Q9H6N6 1097 aa16.1■□□□□ 0.17
SRRM4-201ENST00000267260 GOLGA6L22H0YM25 854 aa16.1■□□□□ 0.17
SRRM4-201ENST00000267260 CCDC136Q96JN2 1154 aa16.1■□□□□ 0.17
SRRM4-201ENST00000267260 DNTTIP2Q5QJE6 756 aaKnown RBP16.08■□□□□ 0.17
SRRM4-201ENST00000267260 TONSLQ96HA7 1378 aa16.06■□□□□ 0.16
SRRM4-201ENST00000267260 PTMAP06454 111 aaKnown RBP16.05■□□□□ 0.16
SRRM4-201ENST00000267260 NAP1L5Q96NT1 182 aaPredicted RBP16.04■□□□□ 0.16
SRRM4-201ENST00000267260 HNRNPUQ00839 825 aaKnown RBP eCLIP16.03■□□□□ 0.16
SRRM4-201ENST00000267260 ZRSR1Q15695 479 aaKnown RBP16.02■□□□□ 0.15
SRRM4-201ENST00000267260 ESF1Q9H501 851 aaKnown RBP16.01■□□□□ 0.15
SRRM4-201ENST00000267260 TMC1Q8TDI8 760 aa15.98■□□□□ 0.15
SRRM4-201ENST00000267260 WDR43Q15061 677 aaKnown RBP eCLIP15.97■□□□□ 0.15
SRRM4-201ENST00000267260 GOLGA6L6A8MZA4 724 aa15.94■□□□□ 0.14
SRRM4-201ENST00000267260 CASC1Q6TDU7 716 aa15.93■□□□□ 0.14
SRRM4-201ENST00000267260 STAG3Q9UJ98 1225 aa15.93■□□□□ 0.14
SRRM4-201ENST00000267260 FAM9BQ8IZU0 186 aa15.91■□□□□ 0.14
SRRM4-201ENST00000267260 CHAF1AQ13111 956 aaPredicted RBP15.9■□□□□ 0.14
SRRM4-201ENST00000267260 PPM1GO15355 546 aaPredicted RBP15.87■□□□□ 0.13
SRRM4-201ENST00000267260 NRDCO43847 1150 aa15.86■□□□□ 0.13
SRRM4-201ENST00000267260 FBLN2P98095 1184 aa15.85■□□□□ 0.13
SRRM4-201ENST00000267260 AMER1Q5JTC6 1135 aaPredicted RBP15.82■□□□□ 0.12
SRRM4-201ENST00000267260 ZNF777Q9ULD5 760 aaPredicted RBP15.8■□□□□ 0.12
SRRM4-201ENST00000267260 DCAF1Q9Y4B6 1507 aa15.79■□□□□ 0.12
SRRM4-201ENST00000267260 RTN4Q9NQC3 1192 aaKnown RBP15.78■□□□□ 0.12
SRRM4-201ENST00000267260 L1TD1Q5T7N2 865 aaKnown RBP15.77■□□□□ 0.11
SRRM4-201ENST00000267260 SALL2Q9Y467 1007 aaPredicted RBP15.77■□□□□ 0.11
SRRM4-201ENST00000267260 DDX10Q13206 875 aaKnown RBP15.76■□□□□ 0.11
SRRM4-201ENST00000267260 MSNP26038 577 aaKnown RBP15.76■□□□□ 0.11
SRRM4-201ENST00000267260 CHGAP10645 457 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms