RNA–Protein interactions for RNA: ENST00000438989.1

AC007041.1-201, humanhuman

BASIC

Gene AC007041.1, Length 1,155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007041.1-201ENST00000438989 AEBP2Q6ZN18 517 aaPredicted RBP33.95■■■■□ 3.03
AC007041.1-201ENST00000438989 CHIC1Q5VXU3 224 aa33.71■■■□□ 2.99
AC007041.1-201ENST00000438989 PHF23Q9BUL5 403 aaPredicted RBP29.7■■■□□ 2.35
AC007041.1-201ENST00000438989 SENP3Q9H4L4 574 aaPredicted RBP28.75■■■□□ 2.19
AC007041.1-201ENST00000438989 PLPPR3Q6T4P5 718 aa27.63■■■□□ 2.01
AC007041.1-201ENST00000438989 NISCHQ9Y2I1 1504 aa27.21■■□□□ 1.95
AC007041.1-201ENST00000438989 FOXD1Q16676 465 aa26.59■■□□□ 1.85
AC007041.1-201ENST00000438989 ADRA2BP18089 450 aa26.02■■□□□ 1.76
AC007041.1-201ENST00000438989 PPP6R1Q9UPN7 881 aa26.02■■□□□ 1.76
AC007041.1-201ENST00000438989 PIAS4Q8N2W9 510 aaPredicted RBP25.21■■□□□ 1.63
AC007041.1-201ENST00000438989 KCNA4P22459 653 aa24.45■■□□□ 1.5
AC007041.1-201ENST00000438989 PPP4R3CPQ6ZMV5 832 aa24.41■■□□□ 1.5
AC007041.1-201ENST00000438989 MSH5O43196 834 aa24.33■■□□□ 1.49
AC007041.1-201ENST00000438989 NCBP3Q53F19 620 aaKnown RBP23.94■■□□□ 1.42
AC007041.1-201ENST00000438989 SCAF1Q9H7N4 1312 aaKnown RBP23.84■■□□□ 1.41
AC007041.1-201ENST00000438989 CCDC180Q9P1Z9 1646 aa23.74■■□□□ 1.39
AC007041.1-201ENST00000438989 CNKSR2Q8WXI2 1034 aa23.61■■□□□ 1.37
AC007041.1-201ENST00000438989 NPM3O75607 178 aaKnown RBP23.58■■□□□ 1.37
AC007041.1-201ENST00000438989 MAPK8IP2Q13387 824 aaPredicted RBP23.44■■□□□ 1.34
AC007041.1-201ENST00000438989 SLC4A1APQ9BWU0 796 aaKnown RBP23.39■■□□□ 1.33
AC007041.1-201ENST00000438989 EHMT2Q96KQ7 1210 aa23.33■■□□□ 1.33
AC007041.1-201ENST00000438989 DMRT2Q9Y5R5 561 aa23.04■■□□□ 1.28
AC007041.1-201ENST00000438989 RNF216Q9NWF9 866 aaPredicted RBP23.02■■□□□ 1.28
AC007041.1-201ENST00000438989 ZCCHC6Q5VYS8 1495 aaKnown RBP22.95■■□□□ 1.26
AC007041.1-201ENST00000438989 DNAJC5BQ9UF47 199 aa22.87■■□□□ 1.25
AC007041.1-201ENST00000438989 CSRNP3Q8WYN3 585 aa22.84■■□□□ 1.25
AC007041.1-201ENST00000438989 HOXD11P31277 338 aaPredicted RBP22.78■■□□□ 1.24
AC007041.1-201ENST00000438989 DCAF1Q9Y4B6 1507 aa22.52■■□□□ 1.19
AC007041.1-201ENST00000438989 ZBTB22O15209 634 aa22.5■■□□□ 1.19
AC007041.1-201ENST00000438989 FOXD4L1Q9NU39 408 aa22.36■■□□□ 1.17
AC007041.1-201ENST00000438989 SHROOM4Q9ULL8 1493 aa22.22■■□□□ 1.15
AC007041.1-201ENST00000438989 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
AC007041.1-201ENST00000438989 ABCC9O60706 1549 aa22.15■■□□□ 1.14
AC007041.1-201ENST00000438989 SLC4A2P04920 1241 aa22.12■■□□□ 1.13
AC007041.1-201ENST00000438989 DCAF8L2P0C7V8 631 aa22.1■■□□□ 1.13
AC007041.1-201ENST00000438989 NACADO15069 1562 aa21.96■■□□□ 1.11
AC007041.1-201ENST00000438989 DCAF8L1A6NGE4 600 aa21.96■■□□□ 1.11
AC007041.1-201ENST00000438989 SCRIBQ14160 1630 aa21.81■■□□□ 1.08
AC007041.1-201ENST00000438989 MYCNP04198 464 aaPredicted RBP21.78■■□□□ 1.08
AC007041.1-201ENST00000438989 RB1CC1Q8TDY2 1594 aa21.73■■□□□ 1.07
AC007041.1-201ENST00000438989 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.69■■□□□ 1.06
AC007041.1-201ENST00000438989 ATXN8OSP0DMR3 200 aa21.57■■□□□ 1.04
AC007041.1-201ENST00000438989 UNC13AQ9UPW8 1703 aa21.52■■□□□ 1.04
AC007041.1-201ENST00000438989 U3KPZ7 1027 aaPredicted RBP21.4■■□□□ 1.02
AC007041.1-201ENST00000438989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.36■■□□□ 1.01
AC007041.1-201ENST00000438989 HNRNPUL2Q1KMD3 747 aaKnown RBP21.36■■□□□ 1.01
AC007041.1-201ENST00000438989 SUPT5HO00267 1087 aaKnown RBP21.34■■□□□ 1.01
AC007041.1-201ENST00000438989 SAMD1Q6SPF0 538 aaPredicted RBP21.29■■□□□ 1
AC007041.1-201ENST00000438989 BICRAQ9NZM4 1560 aa21.19■□□□□ 0.98
AC007041.1-201ENST00000438989 POTEDQ86YR6 584 aa21.16■□□□□ 0.98
AC007041.1-201ENST00000438989 RSF1Q96T23 1441 aaPredicted RBP21.14■□□□□ 0.98
AC007041.1-201ENST00000438989 ATF5Q9Y2D1 282 aaPredicted RBP21.14■□□□□ 0.97
AC007041.1-201ENST00000438989 CECR2Q9BXF3 1484 aa21.13■□□□□ 0.97
AC007041.1-201ENST00000438989 MROH2BQ7Z745 1585 aa21.06■□□□□ 0.96
AC007041.1-201ENST00000438989 APLP2Q06481 763 aa20.99■□□□□ 0.95
AC007041.1-201ENST00000438989 BAZ1AQ9NRL2 1556 aaPredicted RBP20.97■□□□□ 0.95
AC007041.1-201ENST00000438989 SMARCA4P51532 1647 aa20.94■□□□□ 0.94
AC007041.1-201ENST00000438989 WIZO95785 1651 aa20.93■□□□□ 0.94
AC007041.1-201ENST00000438989 RNF39Q9H2S5 420 aa20.89■□□□□ 0.93
AC007041.1-201ENST00000438989 PABPN1Q86U42 306 aaKnown RBP eCLIP20.82■□□□□ 0.92
AC007041.1-201ENST00000438989 ZNF219Q9P2Y4 722 aaPredicted RBP20.77■□□□□ 0.92
AC007041.1-201ENST00000438989 TOP2AP11388 1531 aaKnown RBP20.69■□□□□ 0.9
AC007041.1-201ENST00000438989 C1QBPQ07021 282 aaKnown RBP20.69■□□□□ 0.9
AC007041.1-201ENST00000438989 PEG3Q9GZU2 1588 aa20.68■□□□□ 0.9
AC007041.1-201ENST00000438989 SPINK5Q9NQ38 1064 aaPredicted RBP20.62■□□□□ 0.89
AC007041.1-201ENST00000438989 FKBP8Q14318 412 aa20.6■□□□□ 0.89
AC007041.1-201ENST00000438989 EIF4G1Q04637 1599 aaKnown RBP20.57■□□□□ 0.88
AC007041.1-201ENST00000438989 TRHP20396 242 aaPredicted RBP20.55■□□□□ 0.88
AC007041.1-201ENST00000438989 SMARCA2P51531 1590 aa20.54■□□□□ 0.88
AC007041.1-201ENST00000438989 CAPN15O75808 1086 aa20.52■□□□□ 0.88
AC007041.1-201ENST00000438989 ATAD2BQ9ULI0 1458 aa20.47■□□□□ 0.87
AC007041.1-201ENST00000438989 CCDC88BA6NC98 1476 aa20.43■□□□□ 0.86
AC007041.1-201ENST00000438989 POLA2Q14181 598 aa20.37■□□□□ 0.85
AC007041.1-201ENST00000438989 BAZ1BQ9UIG0 1483 aaKnown RBP20.34■□□□□ 0.85
AC007041.1-201ENST00000438989 HMGXB3Q12766 1538 aa20.31■□□□□ 0.84
AC007041.1-201ENST00000438989 MKRN4PQ13434 485 aaPredicted RBP20.25■□□□□ 0.83
AC007041.1-201ENST00000438989 NCAPD3P42695 1498 aa20.24■□□□□ 0.83
AC007041.1-201ENST00000438989 FBLN2P98095 1184 aa20.23■□□□□ 0.83
AC007041.1-201ENST00000438989 ABCB7O75027 752 aa20.16■□□□□ 0.82
AC007041.1-201ENST00000438989 CC2D2AQ9P2K1 1620 aa20.13■□□□□ 0.81
AC007041.1-201ENST00000438989 ABCC8Q09428 1581 aa20.11■□□□□ 0.81
AC007041.1-201ENST00000438989 ZBTB12Q9Y330 459 aaPredicted RBP20.09■□□□□ 0.81
AC007041.1-201ENST00000438989 SPDYE4A6NLX3 237 aa20.07■□□□□ 0.8
AC007041.1-201ENST00000438989 DSG3P32926 999 aa20.07■□□□□ 0.8
AC007041.1-201ENST00000438989 TRIM41Q8WV44 630 aa20.02■□□□□ 0.8
AC007041.1-201ENST00000438989 PRDM2Q13029 1718 aa19.96■□□□□ 0.79
AC007041.1-201ENST00000438989 CACNB1Q02641 598 aaPredicted RBP19.93■□□□□ 0.78
AC007041.1-201ENST00000438989 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
AC007041.1-201ENST00000438989 WRNQ14191 1432 aaPredicted RBP eCLIP19.85■□□□□ 0.77
AC007041.1-201ENST00000438989 CFTRP13569 1480 aa19.85■□□□□ 0.77
AC007041.1-201ENST00000438989 PROM2Q8N271 834 aa19.84■□□□□ 0.77
AC007041.1-201ENST00000438989 BIVM-ERCC5R4GMW8 1640 aa19.82■□□□□ 0.76
AC007041.1-201ENST00000438989 LOC105371045A0A1W2PR82 267 aa19.79■□□□□ 0.76
AC007041.1-201ENST00000438989 TOP2BQ02880 1626 aa19.78■□□□□ 0.76
AC007041.1-201ENST00000438989 AMER1Q5JTC6 1135 aaPredicted RBP19.77■□□□□ 0.76
AC007041.1-201ENST00000438989 FBXO3Q9UK99 471 aa19.76■□□□□ 0.75
AC007041.1-201ENST00000438989 FAM9AQ8IZU1 332 aaPredicted RBP19.7■□□□□ 0.74
AC007041.1-201ENST00000438989 RTN4Q9NQC3 1192 aaKnown RBP19.7■□□□□ 0.74
AC007041.1-201ENST00000438989 SOGA1O94964 1423 aa19.69■□□□□ 0.74
AC007041.1-201ENST00000438989 CUX1P39880 1505 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms