Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
NELFAQ9H3P2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NELFAQ9H3P2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NELFAQ9H3P2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.21■□□□□ 0.67
NELFAQ9H3P2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NELFAQ9H3P2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NELFAQ9H3P2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NELFAQ9H3P2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.21■□□□□ 0.67
NELFAQ9H3P2 AC092053.2-201ENST00000640557 1818 ntBASIC19.21■□□□□ 0.67
NELFAQ9H3P2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.21■□□□□ 0.67
NELFAQ9H3P2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NELFAQ9H3P2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NELFAQ9H3P2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NELFAQ9H3P2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NELFAQ9H3P2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NELFAQ9H3P2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NELFAQ9H3P2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.21■□□□□ 0.67
NELFAQ9H3P2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NELFAQ9H3P2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NELFAQ9H3P2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.21■□□□□ 0.67
NELFAQ9H3P2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NELFAQ9H3P2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NELFAQ9H3P2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NELFAQ9H3P2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
NELFAQ9H3P2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NELFAQ9H3P2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NELFAQ9H3P2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.2■□□□□ 0.66
NELFAQ9H3P2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.2■□□□□ 0.66
NELFAQ9H3P2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.2■□□□□ 0.66
NELFAQ9H3P2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.2■□□□□ 0.66
NELFAQ9H3P2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NELFAQ9H3P2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NELFAQ9H3P2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NELFAQ9H3P2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.2■□□□□ 0.66
NELFAQ9H3P2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NELFAQ9H3P2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.2■□□□□ 0.66
NELFAQ9H3P2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NELFAQ9H3P2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
NELFAQ9H3P2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.2■□□□□ 0.66
NELFAQ9H3P2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NELFAQ9H3P2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.19■□□□□ 0.66
NELFAQ9H3P2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
NELFAQ9H3P2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.19■□□□□ 0.66
NELFAQ9H3P2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NELFAQ9H3P2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NELFAQ9H3P2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NELFAQ9H3P2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NELFAQ9H3P2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NELFAQ9H3P2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NELFAQ9H3P2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NELFAQ9H3P2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.19■□□□□ 0.66
NELFAQ9H3P2 AP005435.1-201ENST00000529293 1178 ntBASIC19.19■□□□□ 0.66
NELFAQ9H3P2 AC126544.1-201ENST00000580842 1059 ntBASIC19.19■□□□□ 0.66
NELFAQ9H3P2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.19■□□□□ 0.66
NELFAQ9H3P2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NELFAQ9H3P2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.19■□□□□ 0.66
NELFAQ9H3P2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.19■□□□□ 0.66
NELFAQ9H3P2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NELFAQ9H3P2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NELFAQ9H3P2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NELFAQ9H3P2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NELFAQ9H3P2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
NELFAQ9H3P2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NELFAQ9H3P2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NELFAQ9H3P2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NELFAQ9H3P2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.18■□□□□ 0.66
NELFAQ9H3P2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NELFAQ9H3P2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NELFAQ9H3P2 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.18■□□□□ 0.66
NELFAQ9H3P2 AC105265.2-201ENST00000467189 838 ntBASIC19.18■□□□□ 0.66
NELFAQ9H3P2 IGHV3-19-201ENST00000521488 291 ntBASIC19.18■□□□□ 0.66
NELFAQ9H3P2 AC087239.1-201ENST00000622671 572 ntBASIC19.18■□□□□ 0.66
NELFAQ9H3P2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NELFAQ9H3P2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NELFAQ9H3P2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NELFAQ9H3P2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NELFAQ9H3P2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NELFAQ9H3P2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NELFAQ9H3P2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NELFAQ9H3P2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 AC019069.1-201ENST00000610008 1333 ntBASIC19.17■□□□□ 0.66
NELFAQ9H3P2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms