Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VPS11Q9H270 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
VPS11Q9H270 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VPS11Q9H270 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS11Q9H270 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.68■■□□□ 1.06
VPS11Q9H270 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.68■■□□□ 1.06
VPS11Q9H270 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VPS11Q9H270 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS11Q9H270 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS11Q9H270 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS11Q9H270 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS11Q9H270 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.68■■□□□ 1.06
VPS11Q9H270 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS11Q9H270 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS11Q9H270 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.67■■□□□ 1.06
VPS11Q9H270 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
VPS11Q9H270 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VPS11Q9H270 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.67■■□□□ 1.06
VPS11Q9H270 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.67■■□□□ 1.06
VPS11Q9H270 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VPS11Q9H270 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
VPS11Q9H270 RARRES2P1-201ENST00000474487 481 ntBASIC21.67■■□□□ 1.06
VPS11Q9H270 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.67■■□□□ 1.06
VPS11Q9H270 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
VPS11Q9H270 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
VPS11Q9H270 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VPS11Q9H270 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VPS11Q9H270 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS11Q9H270 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
VPS11Q9H270 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.66■■□□□ 1.06
VPS11Q9H270 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS11Q9H270 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS11Q9H270 CA15P2-201ENST00000611168 834 ntBASIC21.66■■□□□ 1.06
VPS11Q9H270 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS11Q9H270 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
VPS11Q9H270 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
VPS11Q9H270 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
VPS11Q9H270 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
VPS11Q9H270 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VPS11Q9H270 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
VPS11Q9H270 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.65■■□□□ 1.06
VPS11Q9H270 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.65■■□□□ 1.06
VPS11Q9H270 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VPS11Q9H270 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.65■■□□□ 1.06
VPS11Q9H270 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.65■■□□□ 1.06
VPS11Q9H270 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VPS11Q9H270 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
VPS11Q9H270 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
VPS11Q9H270 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
VPS11Q9H270 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
VPS11Q9H270 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.64■■□□□ 1.05
VPS11Q9H270 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS11Q9H270 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS11Q9H270 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.64■■□□□ 1.05
VPS11Q9H270 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
VPS11Q9H270 AC073130.3-201ENST00000624389 2278 ntBASIC21.64■■□□□ 1.05
VPS11Q9H270 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS11Q9H270 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VPS11Q9H270 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VPS11Q9H270 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
VPS11Q9H270 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
VPS11Q9H270 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VPS11Q9H270 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.63■■□□□ 1.05
VPS11Q9H270 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.63■■□□□ 1.05
VPS11Q9H270 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.63■■□□□ 1.05
VPS11Q9H270 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.63■■□□□ 1.05
VPS11Q9H270 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS11Q9H270 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VPS11Q9H270 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.63■■□□□ 1.05
VPS11Q9H270 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
VPS11Q9H270 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VPS11Q9H270 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VPS11Q9H270 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VPS11Q9H270 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
VPS11Q9H270 AC009299.2-201ENST00000482477 511 ntBASIC21.62■■□□□ 1.05
VPS11Q9H270 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.62■■□□□ 1.05
VPS11Q9H270 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VPS11Q9H270 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
VPS11Q9H270 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
VPS11Q9H270 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VPS11Q9H270 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VPS11Q9H270 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
VPS11Q9H270 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS11Q9H270 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VPS11Q9H270 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VPS11Q9H270 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
VPS11Q9H270 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.61■■□□□ 1.05
VPS11Q9H270 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VPS11Q9H270 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS11Q9H270 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS11Q9H270 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
VPS11Q9H270 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS11Q9H270 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VPS11Q9H270 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VPS11Q9H270 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.6■■□□□ 1.05
VPS11Q9H270 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS11Q9H270 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.6■■□□□ 1.05
VPS11Q9H270 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VPS11Q9H270 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VPS11Q9H270 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms