Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH15Q96QU1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDH15Q96QU1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.27■■□□□ 1
PCDH15Q96QU1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDH15Q96QU1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.27■■□□□ 1
PCDH15Q96QU1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDH15Q96QU1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDH15Q96QU1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PCDH15Q96QU1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PCDH15Q96QU1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDH15Q96QU1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.27■■□□□ 1
PCDH15Q96QU1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.27■■□□□ 1
PCDH15Q96QU1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.27■■□□□ 1
PCDH15Q96QU1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.27■■□□□ 1
PCDH15Q96QU1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDH15Q96QU1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.27■■□□□ 1
PCDH15Q96QU1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.27■■□□□ 1
PCDH15Q96QU1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.27■■□□□ 1
PCDH15Q96QU1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
PCDH15Q96QU1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.27■■□□□ 1
PCDH15Q96QU1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PCDH15Q96QU1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PCDH15Q96QU1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCDH15Q96QU1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCDH15Q96QU1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.27■□□□□ 0.99
PCDH15Q96QU1 AC133552.2-202ENST00000575694 574 ntBASIC21.27■□□□□ 0.99
PCDH15Q96QU1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH15Q96QU1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH15Q96QU1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH15Q96QU1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH15Q96QU1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH15Q96QU1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH15Q96QU1 DUSP8P3-201ENST00000399571 1760 ntBASIC21.25■□□□□ 0.99
PCDH15Q96QU1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH15Q96QU1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH15Q96QU1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
PCDH15Q96QU1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH15Q96QU1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH15Q96QU1 AC008687.6-201ENST00000596318 630 ntBASIC21.25■□□□□ 0.99
PCDH15Q96QU1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PCDH15Q96QU1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PCDH15Q96QU1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PCDH15Q96QU1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PCDH15Q96QU1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
PCDH15Q96QU1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH15Q96QU1 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDH15Q96QU1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
PCDH15Q96QU1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.25■□□□□ 0.99
PCDH15Q96QU1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH15Q96QU1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PCDH15Q96QU1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH15Q96QU1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH15Q96QU1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDH15Q96QU1 AC010141.2-201ENST00000452426 721 ntBASIC21.24■□□□□ 0.99
PCDH15Q96QU1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDH15Q96QU1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH15Q96QU1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
PCDH15Q96QU1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDH15Q96QU1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH15Q96QU1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH15Q96QU1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDH15Q96QU1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDH15Q96QU1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH15Q96QU1 CYP2T1P-201ENST00000432607 1285 ntBASIC21.23■□□□□ 0.99
PCDH15Q96QU1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH15Q96QU1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDH15Q96QU1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH15Q96QU1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDH15Q96QU1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH15Q96QU1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PCDH15Q96QU1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDH15Q96QU1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH15Q96QU1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.23■□□□□ 0.99
PCDH15Q96QU1 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.23■□□□□ 0.99
PCDH15Q96QU1 AP001160.3-201ENST00000601484 763 ntBASIC21.23■□□□□ 0.99
PCDH15Q96QU1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PCDH15Q96QU1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH15Q96QU1 AC055733.4-201ENST00000638462 1354 ntBASIC21.22■□□□□ 0.99
PCDH15Q96QU1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.22■□□□□ 0.99
PCDH15Q96QU1 AC010536.3-201ENST00000620306 533 ntBASIC21.22■□□□□ 0.99
PCDH15Q96QU1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
PCDH15Q96QU1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
PCDH15Q96QU1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH15Q96QU1 KRT18P20-201ENST00000548986 1279 ntBASIC21.21■□□□□ 0.99
PCDH15Q96QU1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.21■□□□□ 0.99
PCDH15Q96QU1 AC138907.5-202ENST00000569484 235 ntBASIC21.21■□□□□ 0.99
PCDH15Q96QU1 ITM2C-210ENST00000620962 501 ntBASIC21.21■□□□□ 0.99
PCDH15Q96QU1 AC133041.1-202ENST00000642053 222 ntBASIC21.21■□□□□ 0.99
PCDH15Q96QU1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH15Q96QU1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH15Q96QU1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH15Q96QU1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PCDH15Q96QU1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDH15Q96QU1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH15Q96QU1 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDH15Q96QU1 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.21■□□□□ 0.99
PCDH15Q96QU1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDH15Q96QU1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH15Q96QU1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
PCDH15Q96QU1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms