Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SNED1Q8TER0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC26.6■■□□□ 1.85
SNED1Q8TER0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SNED1Q8TER0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC26.6■■□□□ 1.85
SNED1Q8TER0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC26.6■■□□□ 1.85
SNED1Q8TER0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC26.6■■□□□ 1.85
SNED1Q8TER0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC26.6■■□□□ 1.85
SNED1Q8TER0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SNED1Q8TER0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SNED1Q8TER0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.59■■□□□ 1.85
SNED1Q8TER0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SNED1Q8TER0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
SNED1Q8TER0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
SNED1Q8TER0 DET1-205ENST00000558413 583 ntTSL 4 BASIC26.59■■□□□ 1.85
SNED1Q8TER0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC26.59■■□□□ 1.85
SNED1Q8TER0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SNED1Q8TER0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SNED1Q8TER0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SNED1Q8TER0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SNED1Q8TER0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC26.58■■□□□ 1.85
SNED1Q8TER0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
SNED1Q8TER0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SNED1Q8TER0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.58■■□□□ 1.84
SNED1Q8TER0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC26.57■■□□□ 1.84
SNED1Q8TER0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNED1Q8TER0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNED1Q8TER0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNED1Q8TER0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SNED1Q8TER0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNED1Q8TER0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SNED1Q8TER0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC26.57■■□□□ 1.84
SNED1Q8TER0 AC138907.5-202ENST00000569484 235 ntBASIC26.57■■□□□ 1.84
SNED1Q8TER0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
SNED1Q8TER0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNED1Q8TER0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
SNED1Q8TER0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.57■■□□□ 1.84
SNED1Q8TER0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC26.56■■□□□ 1.84
SNED1Q8TER0 POU5F1P3-201ENST00000428824 1078 ntBASIC26.56■■□□□ 1.84
SNED1Q8TER0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SNED1Q8TER0 AC105036.2-201ENST00000569468 176 ntBASIC26.56■■□□□ 1.84
SNED1Q8TER0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
SNED1Q8TER0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.56■■□□□ 1.84
SNED1Q8TER0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
SNED1Q8TER0 ITM2C-210ENST00000620962 501 ntBASIC26.56■■□□□ 1.84
SNED1Q8TER0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC26.55■■□□□ 1.84
SNED1Q8TER0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNED1Q8TER0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC26.55■■□□□ 1.84
SNED1Q8TER0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNED1Q8TER0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNED1Q8TER0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SNED1Q8TER0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNED1Q8TER0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNED1Q8TER0 CYP2T1P-201ENST00000432607 1285 ntBASIC26.55■■□□□ 1.84
SNED1Q8TER0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC26.55■■□□□ 1.84
SNED1Q8TER0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
SNED1Q8TER0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNED1Q8TER0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
SNED1Q8TER0 KRT18P20-201ENST00000548986 1279 ntBASIC26.54■■□□□ 1.84
SNED1Q8TER0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SNED1Q8TER0 FAM201B-201ENST00000458407 597 ntBASIC26.53■■□□□ 1.84
SNED1Q8TER0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC26.53■■□□□ 1.84
SNED1Q8TER0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SNED1Q8TER0 PRORSD1P-201ENST00000295112 541 ntBASIC26.52■■□□□ 1.84
SNED1Q8TER0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.52■■□□□ 1.84
SNED1Q8TER0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC26.52■■□□□ 1.84
SNED1Q8TER0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SNED1Q8TER0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SNED1Q8TER0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.52■■□□□ 1.84
SNED1Q8TER0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.52■■□□□ 1.84
SNED1Q8TER0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC26.51■■□□□ 1.83
SNED1Q8TER0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC26.51■■□□□ 1.83
SNED1Q8TER0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC26.51■■□□□ 1.83
SNED1Q8TER0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.51■■□□□ 1.83
SNED1Q8TER0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.51■■□□□ 1.83
SNED1Q8TER0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SNED1Q8TER0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.51■■□□□ 1.83
SNED1Q8TER0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
SNED1Q8TER0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
SNED1Q8TER0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC26.5■■□□□ 1.83
SNED1Q8TER0 AC007322.4-201ENST00000509611 723 ntBASIC26.5■■□□□ 1.83
SNED1Q8TER0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SNED1Q8TER0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC26.5■■□□□ 1.83
SNED1Q8TER0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SNED1Q8TER0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC26.5■■□□□ 1.83
SNED1Q8TER0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
SNED1Q8TER0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
SNED1Q8TER0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SNED1Q8TER0 AC068338.2-201ENST00000563278 1430 ntBASIC26.5■■□□□ 1.83
SNED1Q8TER0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SNED1Q8TER0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SNED1Q8TER0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC26.49■■□□□ 1.83
SNED1Q8TER0 AC098590.1-201ENST00000468126 897 ntBASIC26.49■■□□□ 1.83
SNED1Q8TER0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC26.49■■□□□ 1.83
SNED1Q8TER0 AC013268.1-206ENST00000638368 961 ntBASIC26.49■■□□□ 1.83
SNED1Q8TER0 AC112229.1-201ENST00000639295 961 ntBASIC26.49■■□□□ 1.83
SNED1Q8TER0 ABCB10P4-201ENST00000566803 2184 ntBASIC26.49■■□□□ 1.83
SNED1Q8TER0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC26.49■■□□□ 1.83
SNED1Q8TER0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SNED1Q8TER0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SNED1Q8TER0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms