Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC14.48□□□□□ -0.09
LINC01561Q8N1V8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LINC01561Q8N1V8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC01561Q8N1V8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01561Q8N1V8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LINC01561Q8N1V8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01561Q8N1V8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01561Q8N1V8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
LINC01561Q8N1V8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC01561Q8N1V8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LINC01561Q8N1V8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LINC01561Q8N1V8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01561Q8N1V8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01561Q8N1V8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01561Q8N1V8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01561Q8N1V8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01561Q8N1V8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01561Q8N1V8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01561Q8N1V8 Z98882.1-201ENST00000622160 2253 ntBASIC14.47□□□□□ -0.09
LINC01561Q8N1V8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01561Q8N1V8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC01561Q8N1V8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01561Q8N1V8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC14.47□□□□□ -0.09
LINC01561Q8N1V8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LINC01561Q8N1V8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01561Q8N1V8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01561Q8N1V8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01561Q8N1V8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01561Q8N1V8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01561Q8N1V8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01561Q8N1V8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC01561Q8N1V8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01561Q8N1V8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01561Q8N1V8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LINC01561Q8N1V8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
LINC01561Q8N1V8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01561Q8N1V8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.46□□□□□ -0.09
LINC01561Q8N1V8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC14.46□□□□□ -0.09
LINC01561Q8N1V8 CD72-202ENST00000378430 585 ntTSL 3 BASIC14.46□□□□□ -0.09
LINC01561Q8N1V8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC14.46□□□□□ -0.09
LINC01561Q8N1V8 AL033527.3-201ENST00000566366 1196 ntBASIC14.46□□□□□ -0.09
LINC01561Q8N1V8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01561Q8N1V8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
LINC01561Q8N1V8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01561Q8N1V8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.46□□□□□ -0.09
LINC01561Q8N1V8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC01561Q8N1V8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LINC01561Q8N1V8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC01561Q8N1V8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC01561Q8N1V8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 OXCT2P1-201ENST00000447263 1535 ntBASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01561Q8N1V8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC01561Q8N1V8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
LINC01561Q8N1V8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LINC01561Q8N1V8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LINC01561Q8N1V8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LINC01561Q8N1V8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LINC01561Q8N1V8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01561Q8N1V8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01561Q8N1V8 OR7E47P-201ENST00000546390 1422 ntBASIC14.44□□□□□ -0.1
LINC01561Q8N1V8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LINC01561Q8N1V8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01561Q8N1V8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
LINC01561Q8N1V8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01561Q8N1V8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01561Q8N1V8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC01561Q8N1V8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01561Q8N1V8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01561Q8N1V8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01561Q8N1V8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC01561Q8N1V8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms