Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 RHOT2-214ENST00000566214 683 ntTSL 548.56■■■■■ 5.368e-7■■■□□ 14.6
PABPN1Q86U42 RHOT2-215ENST00000566965 879 ntTSL 537.31■■■■□ 3.563e-7■■■□□ 14.6
PABPN1Q86U42 COASY-213ENST00000591753 2225 ntTSL 1 (best)28.79■■■□□ 2.21e-7■■■□□ 14.6
PABPN1Q86U42 COASY-212ENST00000591583 716 ntTSL 226.22■■□□□ 1.791e-7■■■□□ 14.6
PABPN1Q86U42 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.611e-7■■■□□ 14.6
PABPN1Q86U42 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC24.14■■□□□ 1.461e-7■■■□□ 14.6
PABPN1Q86U42 COASY-201ENST00000393818 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.171e-7■■■□□ 14.6
PABPN1Q86U42 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.824e-9■■■□□ 14.6
PABPN1Q86U42 IGSF1-201ENST00000361420 4378 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.034e-9■■■□□ 14.6
PABPN1Q86U42 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.254e-9■■■□□ 14.6
PABPN1Q86U42 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.514e-9■■■□□ 14.6
PABPN1Q86U42 TNFRSF14-212ENST00000475523 1645 ntTSL 1 (best)42.44■■■■■ 4.386e-9■■■□□ 14.6
PABPN1Q86U42 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC38.29■■■■□ 3.726e-9■■■□□ 14.6
PABPN1Q86U42 TNFRSF14-215ENST00000482602 434 ntTSL 536.32■■■■□ 3.46e-9■■■□□ 14.6
PABPN1Q86U42 TNFRSF14-209ENST00000463835 872 ntTSL 236.15■■■■□ 3.386e-9■■■□□ 14.6
PABPN1Q86U42 TNFRSF14-213ENST00000480305 494 ntTSL 535.46■■■■□ 3.276e-9■■■□□ 14.6
PABPN1Q86U42 TNFRSF14-210ENST00000466750 2603 ntTSL 225.31■■□□□ 1.646e-9■■■□□ 14.6
PABPN1Q86U42 TNFRSF14-208ENST00000463471 4255 ntTSL 219.09■□□□□ 0.656e-9■■■□□ 14.6
PABPN1Q86U42 AC092073.1-201ENST00000592740 625 ntAPPRIS P1 TSL 333.8■■■■□ 34e-8■■■□□ 14.6
PABPN1Q86U42 GNL1-203ENST00000462708 774 ntTSL 217.17■□□□□ 0.341e-6■■□□□ 14.5
PABPN1Q86U42 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.583e-6■■□□□ 14.5
PABPN1Q86U42 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.253e-6■■□□□ 14.5
PABPN1Q86U42 AP3D1-203ENST00000585652 4433 ntTSL 219.98■□□□□ 0.793e-6■■□□□ 14.5
PABPN1Q86U42 AP3D1-206ENST00000589223 3357 ntTSL 219.51■□□□□ 0.713e-6■■□□□ 14.5
PABPN1Q86U42 ABCA7-216ENST00000532194 1151 ntTSL 327.13■■□□□ 1.935e-7■■□□□ 14.5
PABPN1Q86U42 SYMPK-210ENST00000598329 1000 ntTSL 324.86■■□□□ 1.572e-6■■□□□ 14.5
PABPN1Q86U42 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.51e-9■■□□□ 14.5
PABPN1Q86U42 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.411e-9■■□□□ 14.5
PABPN1Q86U42 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC22.72■■□□□ 1.231e-9■■□□□ 14.5
PABPN1Q86U42 EPS8L2-208ENST00000526909 3844 ntTSL 519.72■□□□□ 0.751e-9■■□□□ 14.5
PABPN1Q86U42 HSF1-205ENST00000528842 935 ntTSL 239.47■■■■□ 3.915e-8■■□□□ 14.5
PABPN1Q86U42 HSF1-214ENST00000614796 1724 ntTSL 534.37■■■■□ 3.095e-8■■□□□ 14.5
PABPN1Q86U42 DGAT1-203ENST00000524965 1336 ntTSL 528.13■■■□□ 2.091e-6■■□□□ 14.5
PABPN1Q86U42 SFI1-201ENST00000357852 1453 ntTSL 1 (best)34.82■■■■□ 3.165e-8■■□□□ 14.5
PABPN1Q86U42 SFI1-221ENST00000476577 1485 ntTSL 1 (best)33.64■■■□□ 2.985e-8■■□□□ 14.5
PABPN1Q86U42 SFI1-219ENST00000474741 708 ntTSL 527.78■■■□□ 2.045e-8■■□□□ 14.5
PABPN1Q86U42 SFI1-214ENST00000464333 3019 ntTSL 221.88■■□□□ 1.095e-8■■□□□ 14.5
PABPN1Q86U42 QARS-248ENST00000636669 2410 ntTSL 521.23■□□□□ 0.997e-7■■□□□ 14.5
PABPN1Q86U42 QARS-202ENST00000414533 2412 ntTSL 2 BASIC20.78■□□□□ 0.927e-7■■□□□ 14.5
PABPN1Q86U42 QARS-209ENST00000464962 2362 ntTSL 1 (best) BASIC20.44■□□□□ 0.867e-7■■□□□ 14.5
PABPN1Q86U42 QARS-247ENST00000636018 2171 ntTSL 518.89■□□□□ 0.617e-7■■□□□ 14.5
PABPN1Q86U42 QARS-205ENST00000430182 2399 ntTSL 218.6■□□□□ 0.577e-7■■□□□ 14.5
PABPN1Q86U42 QARS-201ENST00000306125 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.437e-7■■□□□ 14.5
PABPN1Q86U42 HDAC6-227ENST00000485102 667 ntTSL 327.61■■■□□ 2.013e-7■■□□□ 14.5
PABPN1Q86U42 PHKA2-207ENST00000481718 3115 ntTSL 217.36■□□□□ 0.378e-11■■□□□ 14.5
PABPN1Q86U42 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC33.56■■■□□ 2.962e-6■■□□□ 14.5
PABPN1Q86U42 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC25.34■■□□□ 1.652e-6■■□□□ 14.5
PABPN1Q86U42 PCGF2-205ENST00000618506 1196 ntTSL 5 BASIC23.92■■□□□ 1.422e-6■■□□□ 14.5
PABPN1Q86U42 PCGF2-204ENST00000616199 3062 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.072e-6■■□□□ 14.5
PABPN1Q86U42 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.982e-6■■□□□ 14.5
PABPN1Q86U42 PCGF2-207ENST00000620225 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.112e-6■■□□□ 14.5
PABPN1Q86U42 ACAD11-205ENST00000485198 2940 ntTSL 1 (best)18.7■□□□□ 0.582e-9■■□□□ 14.5
PABPN1Q86U42 ACADVL-230ENST00000582379 833 ntTSL 319.22■□□□□ 0.672e-16■■□□□ 14.5
PABPN1Q86U42 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.872e-7■■□□□ 14.5
PABPN1Q86U42 CUL7-201ENST00000265348 5254 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.632e-7■■□□□ 14.5
PABPN1Q86U42 RNF149-202ENST00000424632 2010 ntTSL 235.7■■■■□ 3.317e-7■■□□□ 14.5
PABPN1Q86U42 AUP1-208ENST00000486234 984 ntTSL 525.01■■□□□ 1.593e-7■■□□□ 14.5
PABPN1Q86U42 MED24-220ENST00000579364 823 ntTSL 236.96■■■■□ 3.515e-7■■□□□ 14.5
PABPN1Q86U42 MED24-209ENST00000491466 957 ntTSL 528.05■■■□□ 2.085e-7■■□□□ 14.5
PABPN1Q86U42 MYO18A-207ENST00000530254 6479 ntTSL 1 (best)18.61■□□□□ 0.574e-8■■□□□ 14.5
PABPN1Q86U42 MYO18A-209ENST00000531253 7504 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.144e-8■■□□□ 14.5
PABPN1Q86U42 MYO18A-223ENST00000628822 7501 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.144e-8■■□□□ 14.5
PABPN1Q86U42 MYO18A-214ENST00000533112 7522 ntTSL 1 (best) BASIC15.02□□□□□ -0.014e-8■■□□□ 14.5
PABPN1Q86U42 MYO18A-202ENST00000527372 9992 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.074e-8■■□□□ 14.5
PABPN1Q86U42 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.98■■□□□ 1.918e-7■■□□□ 14.5
PABPN1Q86U42 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.818e-7■■□□□ 14.5
PABPN1Q86U42 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.888e-7■■□□□ 14.5
PABPN1Q86U42 PRKRIP1-205ENST00000477886 986 ntTSL 1 (best)49.44■■■■■ 5.514e-7■■□□□ 14.5
PABPN1Q86U42 FASN-205ENST00000584610 857 ntTSL 237.75■■■■□ 3.634e-13■■□□□ 14.5
PABPN1Q86U42 KIFC2-203ENST00000529864 320 ntTSL 537.55■■■■□ 3.65e-10■■□□□ 14.5
PABPN1Q86U42 FASN-202ENST00000578424 951 ntTSL 237.1■■■■□ 3.534e-13■■□□□ 14.5
PABPN1Q86U42 SCRIB-204ENST00000525051 1685 ntTSL 1 (best)35.01■■■■□ 3.194e-7■■□□□ 14.5
PABPN1Q86U42 FASN-204ENST00000580382 681 ntTSL 334.89■■■■□ 3.184e-13■■□□□ 14.5
PABPN1Q86U42 SFSWAP-205ENST00000537164 961 ntTSL 534.59■■■■□ 3.134e-7■■□□□ 14.5
PABPN1Q86U42 ERGIC3-217ENST00000488935 389 ntTSL 233.45■■■□□ 2.955e-10■■□□□ 14.5
PABPN1Q86U42 TRIM28-206ENST00000595974 665 ntTSL 332.4■■■□□ 2.784e-7■■□□□ 14.5
PABPN1Q86U42 TRIM28-213ENST00000598355 714 ntTSL 232.19■■■□□ 2.744e-7■■□□□ 14.5
PABPN1Q86U42 ERGIC3-216ENST00000488384 766 ntTSL 231.79■■■□□ 2.685e-10■■□□□ 14.5
PABPN1Q86U42 SCRIB-208ENST00000546337 516 ntTSL 330.62■■■□□ 2.494e-7■■□□□ 14.5
PABPN1Q86U42 SCRIB-205ENST00000526832 2189 ntTSL 1 (best)30.48■■■□□ 2.474e-7■■□□□ 14.5
PABPN1Q86U42 ABCF3-213ENST00000480539 533 ntTSL 229.47■■■□□ 2.314e-7■■□□□ 14.5
PABPN1Q86U42 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.294e-7■■□□□ 14.5
PABPN1Q86U42 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC29.01■■■□□ 2.245e-10■■□□□ 14.5
PABPN1Q86U42 RANBP3-226ENST00000592197 530 ntTSL 327.37■■□□□ 1.974e-7■■□□□ 14.5
PABPN1Q86U42 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.854e-7■■□□□ 14.5
PABPN1Q86U42 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.734e-7■■□□□ 14.5
PABPN1Q86U42 SFSWAP-203ENST00000535236 5593 ntTSL 1 (best)25.59■■□□□ 1.694e-7■■□□□ 14.5
PABPN1Q86U42 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.614e-7■■□□□ 14.5
PABPN1Q86U42 ERGIC3-220ENST00000640748 832 ntTSL 5 BASIC24.53■■□□□ 1.525e-10■■□□□ 14.5
PABPN1Q86U42 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.495e-10■■□□□ 14.5
PABPN1Q86U42 ERGIC3-206ENST00000416206 1235 ntTSL 524.15■■□□□ 1.465e-10■■□□□ 14.5
PABPN1Q86U42 KIAA0141-205ENST00000507481 1342 ntTSL 524.1■■□□□ 1.454e-7■■□□□ 14.5
PABPN1Q86U42 ERGIC3-208ENST00000442139 472 ntTSL 323.75■■□□□ 1.395e-10■■□□□ 14.5
PABPN1Q86U42 XPO6-204ENST00000563138 562 ntTSL 223.63■■□□□ 1.374e-7■■□□□ 14.5
PABPN1Q86U42 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC22.96■■□□□ 1.274e-7■■□□□ 14.5
PABPN1Q86U42 TRO-221ENST00000475183 632 ntTSL 322.11■■□□□ 1.134e-7■■□□□ 14.5
PABPN1Q86U42 XPO6-203ENST00000562408 709 ntTSL 521.87■■□□□ 1.094e-7■■□□□ 14.5
PABPN1Q86U42 UGGT1-202ENST00000376723 6682 ntTSL 1 (best)21.81■■□□□ 1.084e-7■■□□□ 14.5
PABPN1Q86U42 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.914e-7■■□□□ 14.5
PABPN1Q86U42 TRO-224ENST00000492706 3677 ntTSL 220.63■□□□□ 0.894e-7■■□□□ 14.5
Retrieved 100 of 8,254 protein–RNA pairs in 270.9 ms