Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF544Q6NX49 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.71■□□□□ 0.75
ZNF544Q6NX49 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF544Q6NX49 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF544Q6NX49 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF544Q6NX49 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF544Q6NX49 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ZNF544Q6NX49 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF544Q6NX49 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF544Q6NX49 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF544Q6NX49 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF544Q6NX49 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF544Q6NX49 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF544Q6NX49 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF544Q6NX49 MIR638-201ENST00000385237 100 ntBASIC19.7■□□□□ 0.74
ZNF544Q6NX49 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF544Q6NX49 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF544Q6NX49 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF544Q6NX49 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF544Q6NX49 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNF544Q6NX49 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF544Q6NX49 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF544Q6NX49 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF544Q6NX49 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF544Q6NX49 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF544Q6NX49 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF544Q6NX49 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF544Q6NX49 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF544Q6NX49 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF544Q6NX49 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF544Q6NX49 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
ZNF544Q6NX49 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF544Q6NX49 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF544Q6NX49 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF544Q6NX49 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF544Q6NX49 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF544Q6NX49 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF544Q6NX49 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF544Q6NX49 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNF544Q6NX49 AC096631.2-201ENST00000436136 790 ntBASIC19.68■□□□□ 0.74
ZNF544Q6NX49 SRD5A1P1-201ENST00000442297 786 ntBASIC19.68■□□□□ 0.74
ZNF544Q6NX49 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.68■□□□□ 0.74
ZNF544Q6NX49 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.68■□□□□ 0.74
ZNF544Q6NX49 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
ZNF544Q6NX49 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF544Q6NX49 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF544Q6NX49 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF544Q6NX49 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.67■□□□□ 0.74
ZNF544Q6NX49 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF544Q6NX49 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF544Q6NX49 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF544Q6NX49 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF544Q6NX49 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF544Q6NX49 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF544Q6NX49 AC079630.1-202ENST00000618127 1840 ntBASIC19.67■□□□□ 0.74
ZNF544Q6NX49 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF544Q6NX49 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF544Q6NX49 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF544Q6NX49 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF544Q6NX49 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF544Q6NX49 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ZNF544Q6NX49 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF544Q6NX49 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.66■□□□□ 0.74
ZNF544Q6NX49 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
ZNF544Q6NX49 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF544Q6NX49 AC110285.6-201ENST00000617652 491 ntBASIC19.66■□□□□ 0.74
ZNF544Q6NX49 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ZNF544Q6NX49 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF544Q6NX49 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF544Q6NX49 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ZNF544Q6NX49 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF544Q6NX49 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF544Q6NX49 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF544Q6NX49 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF544Q6NX49 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF544Q6NX49 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ZNF544Q6NX49 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF544Q6NX49 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF544Q6NX49 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF544Q6NX49 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.65■□□□□ 0.74
ZNF544Q6NX49 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ZNF544Q6NX49 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF544Q6NX49 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF544Q6NX49 AC133561.4-201ENST00000566112 224 ntBASIC19.65■□□□□ 0.74
ZNF544Q6NX49 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.65■□□□□ 0.74
ZNF544Q6NX49 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF544Q6NX49 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF544Q6NX49 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF544Q6NX49 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
ZNF544Q6NX49 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF544Q6NX49 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
ZNF544Q6NX49 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF544Q6NX49 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZNF544Q6NX49 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
ZNF544Q6NX49 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
ZNF544Q6NX49 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZNF544Q6NX49 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ZNF544Q6NX49 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ZNF544Q6NX49 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ZNF544Q6NX49 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms