Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.15■□□□□ 0.98
RSPO4Q2I0M5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RSPO4Q2I0M5 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RSPO4Q2I0M5 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RSPO4Q2I0M5 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RSPO4Q2I0M5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RSPO4Q2I0M5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RSPO4Q2I0M5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
RSPO4Q2I0M5 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RSPO4Q2I0M5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.15■□□□□ 0.98
RSPO4Q2I0M5 AC008694.1-202ENST00000636953 945 ntBASIC21.15■□□□□ 0.98
RSPO4Q2I0M5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.15■□□□□ 0.98
RSPO4Q2I0M5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RSPO4Q2I0M5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RSPO4Q2I0M5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RSPO4Q2I0M5 AC144652.1-201ENST00000609974 1624 ntBASIC21.15■□□□□ 0.98
RSPO4Q2I0M5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RSPO4Q2I0M5 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RSPO4Q2I0M5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RSPO4Q2I0M5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RSPO4Q2I0M5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
RSPO4Q2I0M5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.14■□□□□ 0.97
RSPO4Q2I0M5 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.14■□□□□ 0.97
RSPO4Q2I0M5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.14■□□□□ 0.97
RSPO4Q2I0M5 AL359736.2-201ENST00000621992 437 ntBASIC21.14■□□□□ 0.97
RSPO4Q2I0M5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
RSPO4Q2I0M5 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RSPO4Q2I0M5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RSPO4Q2I0M5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RSPO4Q2I0M5 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RSPO4Q2I0M5 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RSPO4Q2I0M5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RSPO4Q2I0M5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RSPO4Q2I0M5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.13■□□□□ 0.97
RSPO4Q2I0M5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.13■□□□□ 0.97
RSPO4Q2I0M5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RSPO4Q2I0M5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RSPO4Q2I0M5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RSPO4Q2I0M5 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RSPO4Q2I0M5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RSPO4Q2I0M5 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RSPO4Q2I0M5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.13■□□□□ 0.97
RSPO4Q2I0M5 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RSPO4Q2I0M5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RSPO4Q2I0M5 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RSPO4Q2I0M5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RSPO4Q2I0M5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RSPO4Q2I0M5 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.12■□□□□ 0.97
RSPO4Q2I0M5 TERF1P5-201ENST00000477545 1207 ntBASIC21.12■□□□□ 0.97
RSPO4Q2I0M5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.12■□□□□ 0.97
RSPO4Q2I0M5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.12■□□□□ 0.97
RSPO4Q2I0M5 AC016405.3-201ENST00000607710 860 ntBASIC21.12■□□□□ 0.97
RSPO4Q2I0M5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RSPO4Q2I0M5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RSPO4Q2I0M5 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.11■□□□□ 0.97
RSPO4Q2I0M5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
RSPO4Q2I0M5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RSPO4Q2I0M5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.11■□□□□ 0.97
RSPO4Q2I0M5 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RSPO4Q2I0M5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RSPO4Q2I0M5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RSPO4Q2I0M5 AL512625.2-201ENST00000417533 625 ntBASIC21.11■□□□□ 0.97
RSPO4Q2I0M5 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.11■□□□□ 0.97
RSPO4Q2I0M5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RSPO4Q2I0M5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.11■□□□□ 0.97
RSPO4Q2I0M5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.11■□□□□ 0.97
RSPO4Q2I0M5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.11■□□□□ 0.97
RSPO4Q2I0M5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.11■□□□□ 0.97
RSPO4Q2I0M5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.11■□□□□ 0.97
RSPO4Q2I0M5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RSPO4Q2I0M5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RSPO4Q2I0M5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RSPO4Q2I0M5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RSPO4Q2I0M5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RSPO4Q2I0M5 HLA-L-211ENST00000482052 1765 ntBASIC21.1■□□□□ 0.97
RSPO4Q2I0M5 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.1■□□□□ 0.97
RSPO4Q2I0M5 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RSPO4Q2I0M5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RSPO4Q2I0M5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RSPO4Q2I0M5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RSPO4Q2I0M5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.1■□□□□ 0.97
RSPO4Q2I0M5 AP003097.1-201ENST00000530657 1135 ntBASIC21.1■□□□□ 0.97
RSPO4Q2I0M5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.1■□□□□ 0.97
RSPO4Q2I0M5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RSPO4Q2I0M5 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RSPO4Q2I0M5 AC145676.1-201ENST00000514988 2004 ntBASIC21.1■□□□□ 0.97
RSPO4Q2I0M5 AC009237.3-201ENST00000393279 1427 ntBASIC21.1■□□□□ 0.97
RSPO4Q2I0M5 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RSPO4Q2I0M5 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RSPO4Q2I0M5 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RSPO4Q2I0M5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RSPO4Q2I0M5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RSPO4Q2I0M5 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RSPO4Q2I0M5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
RSPO4Q2I0M5 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RSPO4Q2I0M5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RSPO4Q2I0M5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RSPO4Q2I0M5 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.09■□□□□ 0.97
RSPO4Q2I0M5 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RSPO4Q2I0M5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms