Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCR4P61073 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCR4P61073 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.67■□□□□ 0.74
CXCR4P61073 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCR4P61073 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCR4P61073 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCR4P61073 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCR4P61073 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCR4P61073 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.67■□□□□ 0.74
CXCR4P61073 SNX5-217ENST00000606557 1087 ntBASIC19.67■□□□□ 0.74
CXCR4P61073 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CXCR4P61073 AC009086.3-201ENST00000623486 1008 ntBASIC19.67■□□□□ 0.74
CXCR4P61073 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCR4P61073 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCR4P61073 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CXCR4P61073 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CXCR4P61073 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCR4P61073 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCR4P61073 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCR4P61073 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCR4P61073 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CXCR4P61073 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CXCR4P61073 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CXCR4P61073 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.66■□□□□ 0.74
CXCR4P61073 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CXCR4P61073 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
CXCR4P61073 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.66■□□□□ 0.74
CXCR4P61073 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.66■□□□□ 0.74
CXCR4P61073 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.66■□□□□ 0.74
CXCR4P61073 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CXCR4P61073 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CXCR4P61073 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CXCR4P61073 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CXCR4P61073 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCR4P61073 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CXCR4P61073 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CXCR4P61073 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCR4P61073 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.65■□□□□ 0.74
CXCR4P61073 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCR4P61073 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCR4P61073 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CXCR4P61073 LINC01006-201ENST00000333319 2292 ntBASIC19.64■□□□□ 0.74
CXCR4P61073 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CXCR4P61073 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CXCR4P61073 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.64■□□□□ 0.73
CXCR4P61073 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CXCR4P61073 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CXCR4P61073 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.64■□□□□ 0.73
CXCR4P61073 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CXCR4P61073 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CXCR4P61073 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CXCR4P61073 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CXCR4P61073 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CXCR4P61073 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CXCR4P61073 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CXCR4P61073 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CXCR4P61073 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CXCR4P61073 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CXCR4P61073 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CXCR4P61073 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.63■□□□□ 0.73
CXCR4P61073 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CXCR4P61073 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CXCR4P61073 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CXCR4P61073 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CXCR4P61073 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CXCR4P61073 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CXCR4P61073 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CXCR4P61073 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CXCR4P61073 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CXCR4P61073 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CXCR4P61073 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CXCR4P61073 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CXCR4P61073 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CXCR4P61073 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CXCR4P61073 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CXCR4P61073 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CXCR4P61073 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.62■□□□□ 0.73
CXCR4P61073 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.62■□□□□ 0.73
CXCR4P61073 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CXCR4P61073 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CXCR4P61073 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CXCR4P61073 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CXCR4P61073 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CXCR4P61073 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CXCR4P61073 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CXCR4P61073 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CXCR4P61073 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.61■□□□□ 0.73
CXCR4P61073 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CXCR4P61073 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CXCR4P61073 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CXCR4P61073 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
CXCR4P61073 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
CXCR4P61073 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CXCR4P61073 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CXCR4P61073 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CXCR4P61073 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.61■□□□□ 0.73
CXCR4P61073 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.61■□□□□ 0.73
CXCR4P61073 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.61■□□□□ 0.73
CXCR4P61073 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.61■□□□□ 0.73
CXCR4P61073 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms