Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
AP3S2P59780 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3S2P59780 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
AP3S2P59780 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
AP3S2P59780 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.52■□□□□ 0.56
AP3S2P59780 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
AP3S2P59780 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3S2P59780 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3S2P59780 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
AP3S2P59780 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3S2P59780 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3S2P59780 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
AP3S2P59780 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3S2P59780 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3S2P59780 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
AP3S2P59780 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
AP3S2P59780 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
AP3S2P59780 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
AP3S2P59780 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.51■□□□□ 0.55
AP3S2P59780 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP3S2P59780 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
AP3S2P59780 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.51■□□□□ 0.55
AP3S2P59780 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.51■□□□□ 0.55
AP3S2P59780 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP3S2P59780 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.51■□□□□ 0.55
AP3S2P59780 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
AP3S2P59780 AC133552.2-201ENST00000619106 1032 ntBASIC18.51■□□□□ 0.55
AP3S2P59780 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP3S2P59780 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP3S2P59780 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP3S2P59780 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
AP3S2P59780 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
AP3S2P59780 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
AP3S2P59780 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP3S2P59780 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
AP3S2P59780 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3S2P59780 AF106564.1-201ENST00000607058 2553 ntBASIC18.5■□□□□ 0.55
AP3S2P59780 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
AP3S2P59780 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3S2P59780 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
AP3S2P59780 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
AP3S2P59780 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3S2P59780 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.5■□□□□ 0.55
AP3S2P59780 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.5■□□□□ 0.55
AP3S2P59780 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3S2P59780 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.5■□□□□ 0.55
AP3S2P59780 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.5■□□□□ 0.55
AP3S2P59780 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3S2P59780 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
AP3S2P59780 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.5■□□□□ 0.55
AP3S2P59780 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.5■□□□□ 0.55
AP3S2P59780 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.5■□□□□ 0.55
AP3S2P59780 AC009831.1-201ENST00000580420 1582 ntBASIC18.5■□□□□ 0.55
AP3S2P59780 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
AP3S2P59780 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3S2P59780 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
AP3S2P59780 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.5■□□□□ 0.55
AP3S2P59780 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3S2P59780 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.49■□□□□ 0.55
AP3S2P59780 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.49■□□□□ 0.55
AP3S2P59780 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP3S2P59780 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.49■□□□□ 0.55
AP3S2P59780 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.49■□□□□ 0.55
AP3S2P59780 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.49■□□□□ 0.55
AP3S2P59780 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.49■□□□□ 0.55
AP3S2P59780 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
AP3S2P59780 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.49■□□□□ 0.55
AP3S2P59780 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP3S2P59780 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
AP3S2P59780 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.49■□□□□ 0.55
AP3S2P59780 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP3S2P59780 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP3S2P59780 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP3S2P59780 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
AP3S2P59780 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP3S2P59780 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
AP3S2P59780 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.48■□□□□ 0.55
AP3S2P59780 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3S2P59780 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3S2P59780 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.48■□□□□ 0.55
AP3S2P59780 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3S2P59780 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP3S2P59780 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3S2P59780 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.48■□□□□ 0.55
AP3S2P59780 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.48■□□□□ 0.55
AP3S2P59780 AC138932.1-201ENST00000534164 6830 ntBASIC18.48■□□□□ 0.55
AP3S2P59780 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3S2P59780 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP3S2P59780 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP3S2P59780 RPS2P35-201ENST00000443417 897 ntBASIC18.48■□□□□ 0.55
AP3S2P59780 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
AP3S2P59780 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.48■□□□□ 0.55
AP3S2P59780 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3S2P59780 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP3S2P59780 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3S2P59780 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
AP3S2P59780 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.48■□□□□ 0.55
AP3S2P59780 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3S2P59780 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP3S2P59780 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms