Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.75■□□□□ 0.59
CLDN12P56749 FEM1AP4-201ENST00000443167 1987 ntBASIC18.75■□□□□ 0.59
CLDN12P56749 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN12P56749 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN12P56749 AC005703.6-201ENST00000623265 1329 ntBASIC18.74■□□□□ 0.59
CLDN12P56749 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CLDN12P56749 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN12P56749 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN12P56749 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CLDN12P56749 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN12P56749 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN12P56749 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CLDN12P56749 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN12P56749 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN12P56749 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN12P56749 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN12P56749 CA15P2-201ENST00000611168 834 ntBASIC18.74■□□□□ 0.59
CLDN12P56749 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CLDN12P56749 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN12P56749 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CLDN12P56749 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN12P56749 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.74■□□□□ 0.59
CLDN12P56749 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN12P56749 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN12P56749 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN12P56749 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN12P56749 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN12P56749 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CLDN12P56749 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN12P56749 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN12P56749 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
CLDN12P56749 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN12P56749 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN12P56749 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN12P56749 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN12P56749 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CLDN12P56749 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN12P56749 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN12P56749 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN12P56749 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN12P56749 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN12P56749 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN12P56749 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN12P56749 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CLDN12P56749 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN12P56749 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN12P56749 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN12P56749 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN12P56749 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN12P56749 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN12P56749 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN12P56749 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN12P56749 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN12P56749 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN12P56749 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN12P56749 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.71■□□□□ 0.59
CLDN12P56749 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CLDN12P56749 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN12P56749 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN12P56749 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN12P56749 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN12P56749 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.71■□□□□ 0.59
CLDN12P56749 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN12P56749 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN12P56749 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN12P56749 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN12P56749 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN12P56749 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN12P56749 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN12P56749 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN12P56749 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN12P56749 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN12P56749 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.7■□□□□ 0.58
CLDN12P56749 MIR4508-201ENST00000584178 70 ntBASIC18.7■□□□□ 0.58
CLDN12P56749 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN12P56749 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN12P56749 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN12P56749 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CLDN12P56749 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN12P56749 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN12P56749 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN12P56749 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN12P56749 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.7■□□□□ 0.58
CLDN12P56749 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN12P56749 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN12P56749 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN12P56749 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CLDN12P56749 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN12P56749 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN12P56749 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN12P56749 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN12P56749 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN12P56749 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN12P56749 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN12P56749 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN12P56749 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN12P56749 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN12P56749 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN12P56749 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN12P56749 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms