Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CMC4P56277 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CMC4P56277 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CMC4P56277 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CMC4P56277 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CMC4P56277 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CMC4P56277 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CMC4P56277 AC027612.3-201ENST00000413684 1047 ntBASIC16.08■□□□□ 0.16
CMC4P56277 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.08■□□□□ 0.16
CMC4P56277 AC123595.1-201ENST00000440769 1046 ntBASIC16.08■□□□□ 0.16
CMC4P56277 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CMC4P56277 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.08■□□□□ 0.16
CMC4P56277 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.08■□□□□ 0.16
CMC4P56277 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CMC4P56277 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CMC4P56277 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.08■□□□□ 0.16
CMC4P56277 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CMC4P56277 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CMC4P56277 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CMC4P56277 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CMC4P56277 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CMC4P56277 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CMC4P56277 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CMC4P56277 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CMC4P56277 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CMC4P56277 ZNRF2P3-201ENST00000424200 374 ntBASIC16.07■□□□□ 0.16
CMC4P56277 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CMC4P56277 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.07■□□□□ 0.16
CMC4P56277 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CMC4P56277 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.07■□□□□ 0.16
CMC4P56277 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CMC4P56277 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CMC4P56277 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CMC4P56277 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CMC4P56277 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CMC4P56277 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.07■□□□□ 0.16
CMC4P56277 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.07■□□□□ 0.16
CMC4P56277 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMC4P56277 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMC4P56277 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.06■□□□□ 0.16
CMC4P56277 AC012676.1-201ENST00000574705 1949 ntBASIC16.06■□□□□ 0.16
CMC4P56277 AC137767.1-201ENST00000602918 1920 ntBASIC16.06■□□□□ 0.16
CMC4P56277 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMC4P56277 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMC4P56277 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CMC4P56277 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMC4P56277 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMC4P56277 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMC4P56277 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.06■□□□□ 0.16
CMC4P56277 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.06■□□□□ 0.16
CMC4P56277 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.06■□□□□ 0.16
CMC4P56277 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMC4P56277 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CMC4P56277 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.06■□□□□ 0.16
CMC4P56277 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CMC4P56277 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.05■□□□□ 0.16
CMC4P56277 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CMC4P56277 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CMC4P56277 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CMC4P56277 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.05■□□□□ 0.16
CMC4P56277 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CMC4P56277 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.05■□□□□ 0.16
CMC4P56277 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.05■□□□□ 0.16
CMC4P56277 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CMC4P56277 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CMC4P56277 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CMC4P56277 LINC02228-203ENST00000641970 1355 ntBASIC16.05■□□□□ 0.16
CMC4P56277 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CMC4P56277 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.05■□□□□ 0.16
CMC4P56277 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.05■□□□□ 0.16
CMC4P56277 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.05■□□□□ 0.16
CMC4P56277 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.05■□□□□ 0.16
CMC4P56277 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CMC4P56277 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CMC4P56277 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CMC4P56277 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CMC4P56277 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CMC4P56277 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.05■□□□□ 0.16
CMC4P56277 AP004607.7-201ENST00000527152 1677 ntBASIC16.05■□□□□ 0.16
CMC4P56277 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CMC4P56277 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CMC4P56277 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CMC4P56277 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.04■□□□□ 0.16
CMC4P56277 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.04■□□□□ 0.16
CMC4P56277 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CMC4P56277 AC139530.1-201ENST00000575312 1977 ntBASIC16.04■□□□□ 0.16
CMC4P56277 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.04■□□□□ 0.16
CMC4P56277 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC16.04■□□□□ 0.16
CMC4P56277 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CMC4P56277 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.04■□□□□ 0.16
CMC4P56277 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CMC4P56277 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CMC4P56277 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.04■□□□□ 0.16
CMC4P56277 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CMC4P56277 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CMC4P56277 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CMC4P56277 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CMC4P56277 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CMC4P56277 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CMC4P56277 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms