Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 ANAPC4-210ENST00000510092 2599 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.682e-6■■■□□ 18.2
CSTF2P33240 MAP3K7-205ENST00000369332 4830 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.72e-6■■■□□ 18.2
CSTF2P33240 ATP9B-201ENST00000307671 3533 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.72e-6■■■□□ 18.2
CSTF2P33240 ATP9B-218ENST00000589732 447 ntTSL 510.63□□□□□ -0.712e-6■■■□□ 18.2
CSTF2P33240 ATP9B-203ENST00000458297 1507 ntTSL 1 (best) BASIC10.58□□□□□ -0.722e-6■■■□□ 18.2
CSTF2P33240 ATP9B-204ENST00000490210 7353 ntTSL 1 (best)10.23□□□□□ -0.772e-6■■■□□ 18.2
CSTF2P33240 AC010186.4-201ENST00000573622 615 ntTSL 3 BASIC9.45□□□□□ -0.94e-12■■■□□ 18.2
CSTF2P33240 ATP9B-202ENST00000426216 4361 ntTSL 5 BASIC8.83□□□□□ -12e-6■■■□□ 18.2
CSTF2P33240 UACA-203ENST00000539319 4026 ntTSL 1 (best) BASIC8.51□□□□□ -1.052e-6■■■□□ 18.2
CSTF2P33240 ATP9B-217ENST00000589326 549 ntTSL 37.66□□□□□ -1.182e-6■■■□□ 18.2
CSTF2P33240 ZC3H7A-206ENST00000571405 1930 ntTSL 26.72□□□□□ -1.332e-6■■■□□ 18.2
CSTF2P33240 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.65□□□□□ -1.342e-6■■■□□ 18.2
CSTF2P33240 AL662795.2-201ENST00000624252 3706 ntBASIC6.3□□□□□ -1.42e-6■■■□□ 18.2
CSTF2P33240 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.442e-6■■■□□ 18.2
CSTF2P33240 UACA-210ENST00000560167 749 ntTSL 45.73□□□□□ -1.492e-6■■■□□ 18.2
CSTF2P33240 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.27□□□□□ -1.572e-6■■■□□ 18.2
CSTF2P33240 CLEC2D-213ENST00000536355 571 ntTSL 44.93□□□□□ -1.622e-6■■■□□ 18.2
CSTF2P33240 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.732e-6■■■□□ 18.2
CSTF2P33240 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.55□□□□□ -1.842e-6■■■□□ 18.2
CSTF2P33240 P4HA1-206ENST00000464310 415 ntTSL 53.47□□□□□ -1.852e-6■■■□□ 18.2
CSTF2P33240 AC092821.3-205ENST00000611052 812 ntTSL 1 (best)3.3□□□□□ -1.884e-12■■■□□ 18.2
CSTF2P33240 ZC3H7A-203ENST00000570862 415 ntTSL 22.53□□□□□ -22e-6■■■□□ 18.2
CSTF2P33240 AC010186.2-204ENST00000537668 439 ntBASIC2.32□□□□□ -2.044e-12■■■□□ 18.2
CSTF2P33240 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC10.87□□□□□ -0.671e-6■■■□□ 18.2
CSTF2P33240 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC9.92□□□□□ -0.821e-6■■■□□ 18.2
CSTF2P33240 RFX7-202ENST00000559847 4165 ntTSL 1 (best)4.68□□□□□ -1.663e-6■■■□□ 18.2
CSTF2P33240 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.763e-6■■■□□ 18.2
CSTF2P33240 ELL2-206ENST00000513343 582 ntTSL 320.6■□□□□ 0.898e-7■■■□□ 18.2
CSTF2P33240 ELL2-203ENST00000506628 520 ntTSL 519.97■□□□□ 0.798e-7■■■□□ 18.2
CSTF2P33240 ELL2-208ENST00000635633 467 ntTSL 36.82□□□□□ -1.328e-7■■■□□ 18.2
CSTF2P33240 ELL2-204ENST00000508694 743 ntTSL 53.29□□□□□ -1.888e-7■■■□□ 18.2
CSTF2P33240 ZNF519-213ENST00000624133 6497 nt6.32□□□□□ -1.43e-6■■■□□ 18.2
CSTF2P33240 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.293e-6■■■□□ 18.2
CSTF2P33240 TTC28-201ENST00000397906 11795 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.623e-6■■■□□ 18.2
CSTF2P33240 TTC28-207ENST00000490475 724 ntTSL 510.29□□□□□ -0.763e-6■■■□□ 18.2
CSTF2P33240 DLEU1-229ENST00000486895 481 ntTSL 1 (best) BASIC10.25□□□□□ -0.773e-6■■■□□ 18.2
CSTF2P33240 DLEU1-225ENST00000484529 400 ntTSL 1 (best)8.92□□□□□ -0.983e-6■■■□□ 18.2
CSTF2P33240 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.993e-6■■■□□ 18.2
CSTF2P33240 AC016205.1-201ENST00000591629 2306 ntTSL 2 BASIC8.36□□□□□ -1.073e-6■■■□□ 18.2
CSTF2P33240 LRP1-206ENST00000554118 418 ntTSL 27.41□□□□□ -1.223e-6■■■□□ 18.2
CSTF2P33240 DLEU1-216ENST00000473075 348 ntTSL 53.92□□□□□ -1.783e-6■■■□□ 18.2
CSTF2P33240 DLEU1-224ENST00000483444 332 ntTSL 1 (best)3.87□□□□□ -1.793e-6■■■□□ 18.2
CSTF2P33240 MAP4K4-213ENST00000476609 3598 ntTSL 29.33□□□□□ -0.926e-7■■■□□ 18.2
CSTF2P33240 ACP6-206ENST00000609196 1874 ntTSL 312.27□□□□□ -0.455e-6■■■□□ 18.1
CSTF2P33240 ACP6-205ENST00000583509 6923 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.825e-6■■■□□ 18.1
CSTF2P33240 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.9■□□□□ 0.465e-6■■■□□ 18.1
CSTF2P33240 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.195e-6■■■□□ 18.1
CSTF2P33240 C2orf72-202ENST00000463834 3141 ntTSL 1 (best)11.15□□□□□ -0.628e-14■■■□□ 18.1
CSTF2P33240 PLCB1-220ENST00000630757 857 ntTSL 35.45□□□□□ -1.542e-7■■■□□ 18.1
CSTF2P33240 PLCB1-229ENST00000637204 100 ntTSL 52.24□□□□□ -2.052e-7■■■□□ 18.1
CSTF2P33240 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.033e-6■■■□□ 18.1
CSTF2P33240 OSBPL10-203ENST00000429492 7723 ntTSL 28.36□□□□□ -1.073e-6■■■□□ 18.1
CSTF2P33240 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.56■□□□□ 0.883e-6■■■□□ 18
CSTF2P33240 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.31■□□□□ 0.843e-6■■■□□ 18
CSTF2P33240 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.813e-6■■■□□ 18
CSTF2P33240 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.9■□□□□ 0.783e-6■■■□□ 18
CSTF2P33240 REV1-203ENST00000413697 4727 ntTSL 218.73■□□□□ 0.593e-6■■■□□ 18
CSTF2P33240 EXOC2-202ENST00000443083 720 ntTSL 318.25■□□□□ 0.513e-6■■■□□ 18
CSTF2P33240 ATRX-217ENST00000624668 583 ntTSL 515.35■□□□□ 0.053e-6■■■□□ 18
CSTF2P33240 ATRX-215ENST00000624193 463 ntTSL 415.3■□□□□ 0.043e-6■■■□□ 18
CSTF2P33240 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -03e-6■■■□□ 18
CSTF2P33240 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.04■□□□□ -03e-6■■■□□ 18
CSTF2P33240 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.26□□□□□ -0.133e-6■■■□□ 18
CSTF2P33240 ATRX-211ENST00000623321 1860 ntTSL 1 (best)14.1□□□□□ -0.153e-6■■■□□ 18
CSTF2P33240 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.253e-6■■■□□ 18
CSTF2P33240 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.18□□□□□ -0.33e-6■■■□□ 18
CSTF2P33240 ATRX-208ENST00000622960 628 ntTSL 512.93□□□□□ -0.343e-6■■■□□ 18
CSTF2P33240 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.423e-6■■■□□ 18
CSTF2P33240 ATRX-214ENST00000624166 4272 ntTSL 1 (best)11.51□□□□□ -0.573e-6■■■□□ 18
CSTF2P33240 ATRX-213ENST00000624032 3071 ntTSL 1 (best)10.81□□□□□ -0.683e-6■■■□□ 18
CSTF2P33240 EXOC2-201ENST00000230449 4449 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.823e-6■■■□□ 18
CSTF2P33240 NEDD4L-206ENST00000431212 3338 ntTSL 1 (best) BASIC9.92□□□□□ -0.826e-7■■■□□ 18
CSTF2P33240 SEM1-205ENST00000444799 1590 ntTSL 2 BASIC9.79□□□□□ -0.843e-6■■■□□ 18
CSTF2P33240 SEM1-204ENST00000417009 350 ntTSL 3 BASIC9.52□□□□□ -0.893e-6■■■□□ 18
CSTF2P33240 ARFIP1-205ENST00000451320 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.893e-6■■■□□ 18
CSTF2P33240 SEM1-206ENST00000449279 699 ntTSL 39.43□□□□□ -0.93e-6■■■□□ 18
CSTF2P33240 ARFIP1-201ENST00000353617 3111 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.943e-6■■■□□ 18
CSTF2P33240 SEM1-214ENST00000613919 610 ntTSL 28.99□□□□□ -0.973e-6■■■□□ 18
CSTF2P33240 SEM1-210ENST00000488005 775 ntTSL 2 BASIC8.92□□□□□ -0.983e-6■■■□□ 18
CSTF2P33240 SEM1-203ENST00000413065 661 ntTSL 1 (best) BASIC8.6□□□□□ -1.033e-6■■■□□ 18
CSTF2P33240 SEM1-223ENST00000623498 582 ntTSL 5 BASIC8.46□□□□□ -1.063e-6■■■□□ 18
CSTF2P33240 ZNF253-202ENST00000589668 297 ntTSL 28.12□□□□□ -1.113e-6■■■□□ 18
CSTF2P33240 SEM1-224ENST00000623693 729 ntTSL 5 BASIC8.08□□□□□ -1.123e-6■■■□□ 18
CSTF2P33240 SEM1-207ENST00000466986 507 ntTSL 27.38□□□□□ -1.233e-6■■■□□ 18
CSTF2P33240 REV1-215ENST00000486117 582 ntTSL 27.37□□□□□ -1.233e-6■■■□□ 18
CSTF2P33240 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.27□□□□□ -1.413e-6■■■□□ 18
CSTF2P33240 SEM1-219ENST00000618105 544 ntTSL 25.77□□□□□ -1.493e-6■■■□□ 18
CSTF2P33240 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.493e-6■■■□□ 18
CSTF2P33240 ZNF253-204ENST00000592725 820 ntTSL 25.6□□□□□ -1.513e-6■■■□□ 18
CSTF2P33240 REV1-207ENST00000465835 3172 ntTSL 54.49□□□□□ -1.693e-6■■■□□ 18
CSTF2P33240 REV1-216ENST00000491752 547 ntTSL 44.45□□□□□ -1.73e-6■■■□□ 18
CSTF2P33240 RUNX1-211ENST00000467692 453 ntTSL 24.44□□□□□ -1.77e-12■■■□□ 18
CSTF2P33240 SEM1-217ENST00000617133 591 ntTSL 24.16□□□□□ -1.743e-6■■■□□ 18
CSTF2P33240 SEM1-220ENST00000619259 462 ntTSL 23.9□□□□□ -1.793e-6■■■□□ 18
CSTF2P33240 REV1-205ENST00000450415 577 ntTSL 43.67□□□□□ -1.823e-6■■■□□ 18
CSTF2P33240 REV1-213ENST00000482887 427 ntTSL 33.67□□□□□ -1.823e-6■■■□□ 18
CSTF2P33240 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.69□□□□□ -1.983e-6■■■□□ 18
CSTF2P33240 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.138e-11■■■□□ 18
CSTF2P33240 AL136295.5-201ENST00000558468 4798 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.658e-11■■■□□ 18
CSTF2P33240 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.257e-7■■■□□ 18
Retrieved 100 of 6,735 protein–RNA pairs in 57.5 ms