RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 NISCHQ9Y2I1 1504 aa20.84■□□□□ 0.93
ATRX-214ENST00000624166 SUPT5HO00267 1087 aaKnown RBP19.51■□□□□ 0.71
ATRX-214ENST00000624166 DCAF8L2P0C7V8 631 aa19.35■□□□□ 0.69
ATRX-214ENST00000624166 SHROOM4Q9ULL8 1493 aa19.25■□□□□ 0.67
ATRX-214ENST00000624166 PCGF6Q9BYE7 350 aa18.93■□□□□ 0.62
ATRX-214ENST00000624166 PELP1Q8IZL8 1130 aaKnown RBP18.81■□□□□ 0.6
ATRX-214ENST00000624166 HRCP23327 699 aa18.77■□□□□ 0.6
ATRX-214ENST00000624166 ZEB1P37275 1124 aaPredicted RBP18.66■□□□□ 0.58
ATRX-214ENST00000624166 MYT1Q01538 1121 aa18.37■□□□□ 0.53
ATRX-214ENST00000624166 CHIC1Q5VXU3 224 aa18.35■□□□□ 0.53
ATRX-214ENST00000624166 TRIM26Q12899 539 aaPredicted RBP18.34■□□□□ 0.53
ATRX-214ENST00000624166 CENPBP07199 599 aaPredicted RBP18.32■□□□□ 0.52
ATRX-214ENST00000624166 EHMT2Q96KQ7 1210 aa18.25■□□□□ 0.51
ATRX-214ENST00000624166 FAM9AQ8IZU1 332 aaPredicted RBP18.19■□□□□ 0.5
ATRX-214ENST00000624166 PPARGC1BQ86YN6 1023 aaKnown RBP18.17■□□□□ 0.5
ATRX-214ENST00000624166 TRIM41Q8WV44 630 aa18.15■□□□□ 0.5
ATRX-214ENST00000624166 CCER1Q8TC90 406 aaPredicted RBP18.09■□□□□ 0.49
ATRX-214ENST00000624166 LOC105371045A0A1W2PR82 267 aa18.02■□□□□ 0.47
ATRX-214ENST00000624166 APLP2Q06481 763 aa17.89■□□□□ 0.46
ATRX-214ENST00000624166 TTBK1Q5TCY1 1321 aaPredicted RBP17.78■□□□□ 0.44
ATRX-214ENST00000624166 DCAF1Q9Y4B6 1507 aa17.74■□□□□ 0.43
ATRX-214ENST00000624166 YTHDC1Q96MU7 727 aaKnown RBP17.67■□□□□ 0.42
ATRX-214ENST00000624166 DIEXFQ68CQ4 756 aaKnown RBP17.61■□□□□ 0.41
ATRX-214ENST00000624166 UBTFP17480 764 aaKnown RBP17.56■□□□□ 0.4
ATRX-214ENST00000624166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.52■□□□□ 0.39
ATRX-214ENST00000624166 ACIN1Q9UKV3 1341 aaKnown RBP17.51■□□□□ 0.39
ATRX-214ENST00000624166 ZCCHC6Q5VYS8 1495 aaKnown RBP17.51■□□□□ 0.39
ATRX-214ENST00000624166 GTF3C3Q9Y5Q9 886 aa17.49■□□□□ 0.39
ATRX-214ENST00000624166 MYO15BQ96JP2 1530 aa17.47■□□□□ 0.39
ATRX-214ENST00000624166 ERICH6Q7L0X2 663 aa17.39■□□□□ 0.38
ATRX-214ENST00000624166 NEFLP07196 543 aa17.39■□□□□ 0.37
ATRX-214ENST00000624166 SCAF1Q9H7N4 1312 aaKnown RBP17.35■□□□□ 0.37
ATRX-214ENST00000624166 RANGAP1P46060 587 aaPredicted RBP17.27■□□□□ 0.35
ATRX-214ENST00000624166 ZNF316A6NFI3 1004 aaPredicted RBP17.26■□□□□ 0.35
ATRX-214ENST00000624166 CCDC180Q9P1Z9 1646 aa17.26■□□□□ 0.35
ATRX-214ENST00000624166 HNRNPUL2Q1KMD3 747 aaKnown RBP17.23■□□□□ 0.35
ATRX-214ENST00000624166 NEUROD1Q13562 356 aa17.18■□□□□ 0.34
ATRX-214ENST00000624166 ABCC9O60706 1549 aa17.17■□□□□ 0.34
ATRX-214ENST00000624166 CLSPNQ9HAW4 1339 aa17.07■□□□□ 0.32
ATRX-214ENST00000624166 ATP1B4Q9UN42 357 aaPredicted RBP16.9■□□□□ 0.3
ATRX-214ENST00000624166 ITGAEP38570 1179 aa16.89■□□□□ 0.29
ATRX-214ENST00000624166 CSRNP3Q8WYN3 585 aa16.88■□□□□ 0.29
ATRX-214ENST00000624166 RSF1Q96T23 1441 aaPredicted RBP16.79■□□□□ 0.28
ATRX-214ENST00000624166 MIER1Q8N108 512 aa16.76■□□□□ 0.27
ATRX-214ENST00000624166 BCANQ96GW7 911 aa16.76■□□□□ 0.27
ATRX-214ENST00000624166 SCRIBQ14160 1630 aa16.73■□□□□ 0.27
ATRX-214ENST00000624166 PABPN1Q86U42 306 aaKnown RBP eCLIP16.7■□□□□ 0.26
ATRX-214ENST00000624166 ANP32CO43423 234 aa16.69■□□□□ 0.26
ATRX-214ENST00000624166 CDK11AQ9UQ88 783 aaPredicted RBP16.67■□□□□ 0.26
ATRX-214ENST00000624166 RTL5Q5HYW3 569 aaPredicted RBP16.61■□□□□ 0.25
ATRX-214ENST00000624166 RB1CC1Q8TDY2 1594 aa16.61■□□□□ 0.25
ATRX-214ENST00000624166 CEP162Q5TB80 1403 aa16.61■□□□□ 0.25
ATRX-214ENST00000624166 EEA1Q15075 1411 aa16.6■□□□□ 0.25
ATRX-214ENST00000624166 FKBP8Q14318 412 aa16.58■□□□□ 0.25
ATRX-214ENST00000624166 FAM50AQ14320 339 aaKnown RBP16.56■□□□□ 0.24
ATRX-214ENST00000624166 TNIKQ9UKE5 1360 aa16.55■□□□□ 0.24
ATRX-214ENST00000624166 ANP32EQ9BTT0 268 aa16.53■□□□□ 0.24
ATRX-214ENST00000624166 MYT1LQ9UL68 1186 aa16.51■□□□□ 0.23
ATRX-214ENST00000624166 DAXXQ9UER7 740 aaPredicted RBP16.49■□□□□ 0.23
ATRX-214ENST00000624166 GOLGA3Q08378 1498 aa16.48■□□□□ 0.23
ATRX-214ENST00000624166 CLIP1P30622 1438 aa16.47■□□□□ 0.23
ATRX-214ENST00000624166 SUPT16HQ9Y5B9 1047 aaKnown RBP16.42■□□□□ 0.22
ATRX-214ENST00000624166 DDX10Q13206 875 aaKnown RBP16.42■□□□□ 0.22
ATRX-214ENST00000624166 POLR3GLQ9BT43 218 aa16.39■□□□□ 0.21
ATRX-214ENST00000624166 ANP32AP39687 249 aaKnown RBP16.31■□□□□ 0.2
ATRX-214ENST00000624166 CEP164Q9UPV0 1460 aa16.31■□□□□ 0.2
ATRX-214ENST00000624166 HNRNPUQ00839 825 aaKnown RBP eCLIP16.3■□□□□ 0.2
ATRX-214ENST00000624166 TRIM52Q96A61 297 aa16.3■□□□□ 0.2
ATRX-214ENST00000624166 TONSLQ96HA7 1378 aa16.29■□□□□ 0.2
ATRX-214ENST00000624166 WRNQ14191 1432 aaPredicted RBP eCLIP16.29■□□□□ 0.2
ATRX-214ENST00000624166 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
ATRX-214ENST00000624166 CECR2Q9BXF3 1484 aa16.24■□□□□ 0.19
ATRX-214ENST00000624166 NACADO15069 1562 aa16.23■□□□□ 0.19
ATRX-214ENST00000624166 BAZ1AQ9NRL2 1556 aaPredicted RBP16.21■□□□□ 0.19
ATRX-214ENST00000624166 SOGA1O94964 1423 aa16.19■□□□□ 0.18
ATRX-214ENST00000624166 BCL11AQ9H165 835 aa16.19■□□□□ 0.18
ATRX-214ENST00000624166 TSHZ2Q9NRE2 1034 aa16.17■□□□□ 0.18
ATRX-214ENST00000624166 VPS8Q8N3P4 1428 aa16.16■□□□□ 0.18
ATRX-214ENST00000624166 MROH2BQ7Z745 1585 aa16.15■□□□□ 0.18
ATRX-214ENST00000624166 CCDC88BA6NC98 1476 aa16.11■□□□□ 0.17
ATRX-214ENST00000624166 P3H3Q8IVL6 736 aa16.11■□□□□ 0.17
ATRX-214ENST00000624166 TIMELESSQ9UNS1 1208 aa16.09■□□□□ 0.17
ATRX-214ENST00000624166 RBM19Q9Y4C8 960 aaKnown RBP16.09■□□□□ 0.17
ATRX-214ENST00000624166 ZBTB47Q9UFB7 747 aaPredicted RBP16.09■□□□□ 0.17
ATRX-214ENST00000624166 FAM9BQ8IZU0 186 aa16.09■□□□□ 0.17
ATRX-214ENST00000624166 CCER2I3L3R5 266 aa16.08■□□□□ 0.17
ATRX-214ENST00000624166 CCDC136Q96JN2 1154 aa16.06■□□□□ 0.16
ATRX-214ENST00000624166 IRX6P78412 446 aaPredicted RBP16.05■□□□□ 0.16
ATRX-214ENST00000624166 CCNB3Q8WWL7 1395 aa16.05■□□□□ 0.16
ATRX-214ENST00000624166 HIRIP3Q9BW71 556 aaPredicted RBP16.05■□□□□ 0.16
ATRX-214ENST00000624166 NBR1Q14596 966 aa16.05■□□□□ 0.16
ATRX-214ENST00000624166 ABCC8Q09428 1581 aa16.05■□□□□ 0.16
ATRX-214ENST00000624166 MRS2Q9HD23 443 aa16.04■□□□□ 0.16
ATRX-214ENST00000624166 PPP4R2Q9NY27 417 aa16.02■□□□□ 0.16
ATRX-214ENST00000624166 NPM2Q86SE8 214 aaKnown RBP16.02■□□□□ 0.15
ATRX-214ENST00000624166 ZNF326Q5BKZ1 582 aaKnown RBP16.01■□□□□ 0.15
ATRX-214ENST00000624166 EIF4G2P78344 907 aaKnown RBP eCLIP15.99■□□□□ 0.15
ATRX-214ENST00000624166 ERICH6BQ5W0A0 696 aa15.97■□□□□ 0.15
ATRX-214ENST00000624166 WIZO95785 1651 aa15.96■□□□□ 0.15
ATRX-214ENST00000624166 KIF27Q86VH2 1401 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms