RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 NISCHQ9Y2I1 1504 aa34.23■■■■□ 3.07
ATRX-211ENST00000623321 CCDC180Q9P1Z9 1646 aa29.93■■■□□ 2.38
ATRX-211ENST00000623321 ZCCHC6Q5VYS8 1495 aaKnown RBP28.71■■■□□ 2.19
ATRX-211ENST00000623321 ABCC9O60706 1549 aa28.44■■■□□ 2.14
ATRX-211ENST00000623321 DCAF8L2P0C7V8 631 aa28.34■■■□□ 2.13
ATRX-211ENST00000623321 DCAF1Q9Y4B6 1507 aa28.33■■■□□ 2.13
ATRX-211ENST00000623321 MYO15BQ96JP2 1530 aa28.07■■■□□ 2.08
ATRX-211ENST00000623321 NACADO15069 1562 aa27.94■■■□□ 2.06
ATRX-211ENST00000623321 SHROOM4Q9ULL8 1493 aa27.75■■■□□ 2.03
ATRX-211ENST00000623321 RB1CC1Q8TDY2 1594 aa27.73■■■□□ 2.03
ATRX-211ENST00000623321 SCRIBQ14160 1630 aa27.46■■□□□ 1.99
ATRX-211ENST00000623321 UNC13AQ9UPW8 1703 aa27.12■■□□□ 1.93
ATRX-211ENST00000623321 BICRAQ9NZM4 1560 aa26.87■■□□□ 1.89
ATRX-211ENST00000623321 PABPN1Q86U42 306 aaKnown RBP eCLIP26.8■■□□□ 1.88
ATRX-211ENST00000623321 SUPT5HO00267 1087 aaKnown RBP26.64■■□□□ 1.86
ATRX-211ENST00000623321 CECR2Q9BXF3 1484 aa26.59■■□□□ 1.85
ATRX-211ENST00000623321 RSF1Q96T23 1441 aaPredicted RBP26.48■■□□□ 1.83
ATRX-211ENST00000623321 BAZ1AQ9NRL2 1556 aaPredicted RBP26.45■■□□□ 1.82
ATRX-211ENST00000623321 MROH2BQ7Z745 1585 aa26.42■■□□□ 1.82
ATRX-211ENST00000623321 SMARCA4P51532 1647 aa26.34■■□□□ 1.81
ATRX-211ENST00000623321 WIZO95785 1651 aa26.19■■□□□ 1.78
ATRX-211ENST00000623321 EIF4G1Q04637 1599 aaKnown RBP26.09■■□□□ 1.77
ATRX-211ENST00000623321 PEG3Q9GZU2 1588 aa26.04■■□□□ 1.76
ATRX-211ENST00000623321 ATAD2BQ9ULI0 1458 aa25.97■■□□□ 1.75
ATRX-211ENST00000623321 SMARCA2P51531 1590 aa25.96■■□□□ 1.75
ATRX-211ENST00000623321 TOP2AP11388 1531 aaKnown RBP25.92■■□□□ 1.74
ATRX-211ENST00000623321 BAZ1BQ9UIG0 1483 aaKnown RBP25.8■■□□□ 1.72
ATRX-211ENST00000623321 NCAPD3P42695 1498 aa25.79■■□□□ 1.72
ATRX-211ENST00000623321 CC2D2AQ9P2K1 1620 aa25.74■■□□□ 1.71
ATRX-211ENST00000623321 HMGXB3Q12766 1538 aa25.72■■□□□ 1.71
ATRX-211ENST00000623321 CCDC88BA6NC98 1476 aa25.66■■□□□ 1.7
ATRX-211ENST00000623321 CHIC1Q5VXU3 224 aa25.43■■□□□ 1.66
ATRX-211ENST00000623321 DNAJC5BQ9UF47 199 aa25.26■■□□□ 1.63
ATRX-211ENST00000623321 CFTRP13569 1480 aa25.16■■□□□ 1.62
ATRX-211ENST00000623321 CADPSQ9ULU8 1353 aa25.12■■□□□ 1.61
ATRX-211ENST00000623321 TRIM41Q8WV44 630 aa25.1■■□□□ 1.61
ATRX-211ENST00000623321 ABCC8Q09428 1581 aa25.03■■□□□ 1.6
ATRX-211ENST00000623321 PRDM2Q13029 1718 aa24.98■■□□□ 1.59
ATRX-211ENST00000623321 WRNQ14191 1432 aaPredicted RBP eCLIP24.94■■□□□ 1.58
ATRX-211ENST00000623321 LAMC3Q9Y6N6 1575 aa24.94■■□□□ 1.58
ATRX-211ENST00000623321 NESP48681 1621 aa24.91■■□□□ 1.58
ATRX-211ENST00000623321 FANCD2Q9BXW9 1451 aa24.82■■□□□ 1.56
ATRX-211ENST00000623321 SYNJ1O43426 1573 aa24.81■■□□□ 1.56
ATRX-211ENST00000623321 PDS5BQ9NTI5 1447 aa24.76■■□□□ 1.55
ATRX-211ENST00000623321 TOP2BQ02880 1626 aa24.75■■□□□ 1.55
ATRX-211ENST00000623321 BIVM-ERCC5R4GMW8 1640 aa24.72■■□□□ 1.55
ATRX-211ENST00000623321 CUX1P39880 1505 aa24.71■■□□□ 1.55
ATRX-211ENST00000623321 CEP164Q9UPV0 1460 aa24.68■■□□□ 1.54
ATRX-211ENST00000623321 FAM9AQ8IZU1 332 aaPredicted RBP24.6■■□□□ 1.53
ATRX-211ENST00000623321 KIF21AQ7Z4S6 1674 aa24.59■■□□□ 1.53
ATRX-211ENST00000623321 DNMBPQ6XZF7 1577 aa24.56■■□□□ 1.52
ATRX-211ENST00000623321 SOGA1O94964 1423 aa24.55■■□□□ 1.52
ATRX-211ENST00000623321 TOPBP1Q92547 1522 aa24.53■■□□□ 1.52
ATRX-211ENST00000623321 EEA1Q15075 1411 aa24.51■■□□□ 1.51
ATRX-211ENST00000623321 URB2Q14146 1524 aaKnown RBP24.5■■□□□ 1.51
ATRX-211ENST00000623321 FGD5Q6ZNL6 1462 aa24.48■■□□□ 1.51
ATRX-211ENST00000623321 RUSC2Q8N2Y8 1516 aa24.46■■□□□ 1.51
ATRX-211ENST00000623321 LOC105371045A0A1W2PR82 267 aa24.43■■□□□ 1.5
ATRX-211ENST00000623321 MRC2Q9UBG0 1479 aa24.43■■□□□ 1.5
ATRX-211ENST00000623321 ERCC6Q03468 1493 aa24.42■■□□□ 1.5
ATRX-211ENST00000623321 CSRNP3Q8WYN3 585 aa24.4■■□□□ 1.5
ATRX-211ENST00000623321 POLA1P09884 1462 aaPredicted RBP24.39■■□□□ 1.5
ATRX-211ENST00000623321 HRCP23327 699 aa24.34■■□□□ 1.49
ATRX-211ENST00000623321 KIF27Q86VH2 1401 aa24.34■■□□□ 1.49
ATRX-211ENST00000623321 WDR62O43379 1518 aa24.3■■□□□ 1.48
ATRX-211ENST00000623321 RAD54L2Q9Y4B4 1467 aa24.3■■□□□ 1.48
ATRX-211ENST00000623321 CUX2O14529 1486 aa24.29■■□□□ 1.48
ATRX-211ENST00000623321 ABCA10Q8WWZ4 1543 aa24.28■■□□□ 1.48
ATRX-211ENST00000623321 THOC2Q8NI27 1593 aaKnown RBP24.25■■□□□ 1.47
ATRX-211ENST00000623321 EHMT2Q96KQ7 1210 aa24.22■■□□□ 1.47
ATRX-211ENST00000623321 WDR97A6NE52 1622 aa24.17■■□□□ 1.46
ATRX-211ENST00000623321 TARBP1Q13395 1621 aaKnown RBP24.17■■□□□ 1.46
ATRX-211ENST00000623321 KIF21BO75037 1637 aa24.16■■□□□ 1.46
ATRX-211ENST00000623321 IGF1RP08069 1367 aa24.14■■□□□ 1.46
ATRX-211ENST00000623321 GOLGA3Q08378 1498 aa24.14■■□□□ 1.46
ATRX-211ENST00000623321 PCGF6Q9BYE7 350 aa24.14■■□□□ 1.45
ATRX-211ENST00000623321 IFT140Q96RY7 1462 aa24.12■■□□□ 1.45
ATRX-211ENST00000623321 PRXQ9BXM0 1461 aa24.12■■□□□ 1.45
ATRX-211ENST00000623321 TDRD9Q8NDG6 1382 aaKnown RBP24.1■■□□□ 1.45
ATRX-211ENST00000623321 ABCA5Q8WWZ7 1642 aa24.07■■□□□ 1.44
ATRX-211ENST00000623321 GAPVD1Q14C86 1478 aa24.06■■□□□ 1.44
ATRX-211ENST00000623321 RAPGEF2Q9Y4G8 1499 aa24.06■■□□□ 1.44
ATRX-211ENST00000623321 UBTFP17480 764 aaKnown RBP24.06■■□□□ 1.44
ATRX-211ENST00000623321 TNIKQ9UKE5 1360 aa24.05■■□□□ 1.44
ATRX-211ENST00000623321 ERICH3Q5RHP9 1530 aa24.05■■□□□ 1.44
ATRX-211ENST00000623321 CARMIL1Q5VZK9 1371 aa24.02■■□□□ 1.44
ATRX-211ENST00000623321 AQRO60306 1485 aaKnown RBP eCLIP23.97■■□□□ 1.43
ATRX-211ENST00000623321 ZNF608Q9ULD9 1512 aaPredicted RBP23.96■■□□□ 1.43
ATRX-211ENST00000623321 CUL7Q14999 1698 aa23.95■■□□□ 1.42
ATRX-211ENST00000623321 GRIN2BQ13224 1484 aa23.9■■□□□ 1.42
ATRX-211ENST00000623321 PBRM1Q86U86 1689 aa23.9■■□□□ 1.42
ATRX-211ENST00000623321 EIF4G3O43432 1585 aaKnown RBP23.87■■□□□ 1.41
ATRX-211ENST00000623321 CEP162Q5TB80 1403 aa23.87■■□□□ 1.41
ATRX-211ENST00000623321 TRIM26Q12899 539 aaPredicted RBP23.83■■□□□ 1.41
ATRX-211ENST00000623321 FHAD1B1AJZ9 1412 aa23.8■■□□□ 1.4
ATRX-211ENST00000623321 ADAMTS12P58397 1594 aa23.76■■□□□ 1.39
ATRX-211ENST00000623321 SNAPC4Q5SXM2 1469 aa23.74■■□□□ 1.39
ATRX-211ENST00000623321 CLIP1P30622 1438 aa23.74■■□□□ 1.39
ATRX-211ENST00000623321 MAGI1Q96QZ7 1491 aaPredicted RBP23.72■■□□□ 1.39
ATRX-211ENST00000623321 RANGAP1P46060 587 aaPredicted RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms