RNA–Protein interactions for RNA: ENST00000490210.6

ATP9B-204, Transcript of ATPase phospholipid transporting 9B (putative), humanhuman

TSL 1 (best)

Gene ATP9B, Length 7,353 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9B-204ENST00000490210 DCAF8L2P0C7V8 631 aa17.1■□□□□ 0.33
ATP9B-204ENST00000490210 PELP1Q8IZL8 1130 aaKnown RBP16.94■□□□□ 0.3
ATP9B-204ENST00000490210 MYT1Q01538 1121 aa16.86■□□□□ 0.29
ATP9B-204ENST00000490210 NISCHQ9Y2I1 1504 aa16.49■□□□□ 0.23
ATP9B-204ENST00000490210 SUPT5HO00267 1087 aaKnown RBP16.4■□□□□ 0.22
ATP9B-204ENST00000490210 CENPBP07199 599 aaPredicted RBP16.29■□□□□ 0.2
ATP9B-204ENST00000490210 ZEB1P37275 1124 aaPredicted RBP16.16■□□□□ 0.18
ATP9B-204ENST00000490210 PCGF6Q9BYE7 350 aa16.14■□□□□ 0.17
ATP9B-204ENST00000490210 ERICH6Q7L0X2 663 aa16.06■□□□□ 0.16
ATP9B-204ENST00000490210 CCER1Q8TC90 406 aaPredicted RBP16.03■□□□□ 0.16
ATP9B-204ENST00000490210 SHROOM4Q9ULL8 1493 aa15.79■□□□□ 0.12
ATP9B-204ENST00000490210 HRCP23327 699 aa15.79■□□□□ 0.12
ATP9B-204ENST00000490210 APLP2Q06481 763 aa15.68■□□□□ 0.1
ATP9B-204ENST00000490210 EHMT2Q96KQ7 1210 aa15.67■□□□□ 0.1
ATP9B-204ENST00000490210 NEFLP07196 543 aa15.64■□□□□ 0.09
ATP9B-204ENST00000490210 YTHDC1Q96MU7 727 aaKnown RBP15.52■□□□□ 0.08
ATP9B-204ENST00000490210 TTBK1Q5TCY1 1321 aaPredicted RBP15.49■□□□□ 0.07
ATP9B-204ENST00000490210 TRIM26Q12899 539 aaPredicted RBP15.45■□□□□ 0.06
ATP9B-204ENST00000490210 FAM9AQ8IZU1 332 aaPredicted RBP15.41■□□□□ 0.06
ATP9B-204ENST00000490210 PPARGC1BQ86YN6 1023 aaKnown RBP15.22■□□□□ 0.03
ATP9B-204ENST00000490210 TRIM41Q8WV44 630 aa15.21■□□□□ 0.03
ATP9B-204ENST00000490210 RTL5Q5HYW3 569 aaPredicted RBP15.14■□□□□ 0.01
ATP9B-204ENST00000490210 DAXXQ9UER7 740 aaPredicted RBP15.13■□□□□ 0.01
ATP9B-204ENST00000490210 GTF3C3Q9Y5Q9 886 aa15.1■□□□□ 0.01
ATP9B-204ENST00000490210 DIEXFQ68CQ4 756 aaKnown RBP15.09■□□□□ 0.01
ATP9B-204ENST00000490210 ACIN1Q9UKV3 1341 aaKnown RBP14.97□□□□□ -0.01
ATP9B-204ENST00000490210 UBTFP17480 764 aaKnown RBP14.93□□□□□ -0.02
ATP9B-204ENST00000490210 ABCC9O60706 1549 aa14.89□□□□□ -0.03
ATP9B-204ENST00000490210 CHIC1Q5VXU3 224 aa14.88□□□□□ -0.03
ATP9B-204ENST00000490210 RANGAP1P46060 587 aaPredicted RBP14.8□□□□□ -0.04
ATP9B-204ENST00000490210 LOC105371045A0A1W2PR82 267 aa14.8□□□□□ -0.04
ATP9B-204ENST00000490210 CLSPNQ9HAW4 1339 aa14.79□□□□□ -0.04
ATP9B-204ENST00000490210 ZNF316A6NFI3 1004 aaPredicted RBP14.79□□□□□ -0.04
ATP9B-204ENST00000490210 MYT1LQ9UL68 1186 aa14.78□□□□□ -0.04
ATP9B-204ENST00000490210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.77□□□□□ -0.05
ATP9B-204ENST00000490210 CDK11AQ9UQ88 783 aaPredicted RBP14.76□□□□□ -0.05
ATP9B-204ENST00000490210 BCANQ96GW7 911 aa14.68□□□□□ -0.06
ATP9B-204ENST00000490210 PABPN1Q86U42 306 aaKnown RBP eCLIP14.66□□□□□ -0.06
ATP9B-204ENST00000490210 GLIPR1L2Q4G1C9 344 aa14.66□□□□□ -0.06
ATP9B-204ENST00000490210 ATP1B4Q9UN42 357 aaPredicted RBP14.65□□□□□ -0.06
ATP9B-204ENST00000490210 HNRNPUL2Q1KMD3 747 aaKnown RBP14.65□□□□□ -0.06
ATP9B-204ENST00000490210 SCAF1Q9H7N4 1312 aaKnown RBP14.6□□□□□ -0.07
ATP9B-204ENST00000490210 EIF5BO60841 1220 aaKnown RBP14.59□□□□□ -0.07
ATP9B-204ENST00000490210 ANP32AP39687 249 aaKnown RBP14.54□□□□□ -0.08
ATP9B-204ENST00000490210 NEUROD1Q13562 356 aa14.5□□□□□ -0.09
ATP9B-204ENST00000490210 ITGAEP38570 1179 aa14.48□□□□□ -0.09
ATP9B-204ENST00000490210 ANP32CO43423 234 aa14.47□□□□□ -0.09
ATP9B-204ENST00000490210 POLR3GLQ9BT43 218 aa14.46□□□□□ -0.09
ATP9B-204ENST00000490210 ANP32EQ9BTT0 268 aa14.41□□□□□ -0.1
ATP9B-204ENST00000490210 FKBP8Q14318 412 aa14.36□□□□□ -0.11
ATP9B-204ENST00000490210 DCAF1Q9Y4B6 1507 aa14.32□□□□□ -0.12
ATP9B-204ENST00000490210 CNGB1Q14028 1251 aaPredicted RBP14.31□□□□□ -0.12
ATP9B-204ENST00000490210 BCL11AQ9H165 835 aa14.27□□□□□ -0.12
ATP9B-204ENST00000490210 ZBTB47Q9UFB7 747 aaPredicted RBP14.24□□□□□ -0.13
ATP9B-204ENST00000490210 ANP32BQ92688 251 aaKnown RBP14.24□□□□□ -0.13
ATP9B-204ENST00000490210 NBR1Q14596 966 aa14.22□□□□□ -0.13
ATP9B-204ENST00000490210 NPM2Q86SE8 214 aaKnown RBP14.22□□□□□ -0.13
ATP9B-204ENST00000490210 FBLN2P98095 1184 aa14.15□□□□□ -0.14
ATP9B-204ENST00000490210 FAM50AQ14320 339 aaKnown RBP14.1□□□□□ -0.15
ATP9B-204ENST00000490210 MIER1Q8N108 512 aa14.07□□□□□ -0.16
ATP9B-204ENST00000490210 HNRNPUQ00839 825 aaKnown RBP eCLIP14.07□□□□□ -0.16
ATP9B-204ENST00000490210 CCDC136Q96JN2 1154 aa14.04□□□□□ -0.16
ATP9B-204ENST00000490210 UPF2Q9HAU5 1272 aaKnown RBP14.04□□□□□ -0.16
ATP9B-204ENST00000490210 ERICH6BQ5W0A0 696 aa14.03□□□□□ -0.16
ATP9B-204ENST00000490210 CANXP27824 592 aaKnown RBP14.02□□□□□ -0.17
ATP9B-204ENST00000490210 TRIM52Q96A61 297 aa14.01□□□□□ -0.17
ATP9B-204ENST00000490210 TNNT2P45379 298 aaPredicted RBP13.98□□□□□ -0.17
ATP9B-204ENST00000490210 DDRGK1Q96HY6 314 aa13.96□□□□□ -0.17
ATP9B-204ENST00000490210 NEFMP07197 916 aa13.96□□□□□ -0.18
ATP9B-204ENST00000490210 HSP90AA1P07900 732 aaKnown RBP13.95□□□□□ -0.18
ATP9B-204ENST00000490210 PPM1GO15355 546 aaPredicted RBP13.95□□□□□ -0.18
ATP9B-204ENST00000490210 DDX10Q13206 875 aaKnown RBP13.95□□□□□ -0.18
ATP9B-204ENST00000490210 SLC4A1APQ9BWU0 796 aaKnown RBP13.94□□□□□ -0.18
ATP9B-204ENST00000490210 SCRIBQ14160 1630 aa13.91□□□□□ -0.18
ATP9B-204ENST00000490210 TRIM44Q96DX7 344 aaPredicted RBP13.89□□□□□ -0.19
ATP9B-204ENST00000490210 SUPT16HQ9Y5B9 1047 aaKnown RBP13.89□□□□□ -0.19
ATP9B-204ENST00000490210 DEKP35659 375 aaKnown RBP13.87□□□□□ -0.19
ATP9B-204ENST00000490210 NOP58Q9Y2X3 529 aaKnown RBP13.87□□□□□ -0.19
ATP9B-204ENST00000490210 CCDC180Q9P1Z9 1646 aa13.87□□□□□ -0.19
ATP9B-204ENST00000490210 RB1CC1Q8TDY2 1594 aa13.87□□□□□ -0.19
ATP9B-204ENST00000490210 FAM9BQ8IZU0 186 aa13.86□□□□□ -0.19
ATP9B-204ENST00000490210 ZNF326Q5BKZ1 582 aaKnown RBP13.86□□□□□ -0.19
ATP9B-204ENST00000490210 RTN4Q9NQC3 1192 aaKnown RBP13.85□□□□□ -0.19
ATP9B-204ENST00000490210 TONSLQ96HA7 1378 aa13.84□□□□□ -0.19
ATP9B-204ENST00000490210 ARXQ96QS3 562 aa13.84□□□□□ -0.19
ATP9B-204ENST00000490210 NPM1P06748 294 aaKnown RBP eCLIP13.83□□□□□ -0.19
ATP9B-204ENST00000490210 BECN1Q14457 450 aa13.83□□□□□ -0.2
ATP9B-204ENST00000490210 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.82□□□□□ -0.2
ATP9B-204ENST00000490210 NAP1L5Q96NT1 182 aaPredicted RBP13.82□□□□□ -0.2
ATP9B-204ENST00000490210 CSRNP3Q8WYN3 585 aa13.81□□□□□ -0.2
ATP9B-204ENST00000490210 IRX6P78412 446 aaPredicted RBP13.81□□□□□ -0.2
ATP9B-204ENST00000490210 RBM19Q9Y4C8 960 aaKnown RBP13.78□□□□□ -0.2
ATP9B-204ENST00000490210 MRS2Q9HD23 443 aa13.77□□□□□ -0.2
ATP9B-204ENST00000490210 PPP4R2Q9NY27 417 aa13.77□□□□□ -0.21
ATP9B-204ENST00000490210 NCLP19338 710 aaKnown RBP13.74□□□□□ -0.21
ATP9B-204ENST00000490210 TMC1Q8TDI8 760 aa13.74□□□□□ -0.21
ATP9B-204ENST00000490210 GOLGA6L22H0YM25 854 aa13.71□□□□□ -0.21
ATP9B-204ENST00000490210 CDK11BP21127 795 aaKnown RBP13.71□□□□□ -0.21
ATP9B-204ENST00000490210 ESF1Q9H501 851 aaKnown RBP13.69□□□□□ -0.22
ATP9B-204ENST00000490210 LAS1LQ9Y4W2 734 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms