Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP24386 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP24386 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP24386 SUDS3P1-201ENST00000505831 966 ntBASIC20.12■□□□□ 0.81
CHMP24386 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP24386 AL031432.3-201ENST00000607698 485 ntBASIC20.12■□□□□ 0.81
CHMP24386 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.12■□□□□ 0.81
CHMP24386 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.12■□□□□ 0.81
CHMP24386 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.12■□□□□ 0.81
CHMP24386 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.12■□□□□ 0.81
CHMP24386 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP24386 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CHMP24386 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP24386 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CHMP24386 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP24386 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP24386 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.11■□□□□ 0.81
CHMP24386 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP24386 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP24386 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CHMP24386 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP24386 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP24386 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP24386 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.11■□□□□ 0.81
CHMP24386 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP24386 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP24386 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.11■□□□□ 0.81
CHMP24386 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.11■□□□□ 0.81
CHMP24386 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP24386 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CHMP24386 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.11■□□□□ 0.81
CHMP24386 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.11■□□□□ 0.81
CHMP24386 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.11■□□□□ 0.81
CHMP24386 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP24386 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP24386 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP24386 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.11■□□□□ 0.81
CHMP24386 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.11■□□□□ 0.81
CHMP24386 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.1■□□□□ 0.81
CHMP24386 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.1■□□□□ 0.81
CHMP24386 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP24386 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP24386 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP24386 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.1■□□□□ 0.81
CHMP24386 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.1■□□□□ 0.81
CHMP24386 AC026310.3-201ENST00000625186 2373 ntBASIC20.1■□□□□ 0.81
CHMP24386 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP24386 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP24386 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP24386 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP24386 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.1■□□□□ 0.81
CHMP24386 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP24386 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP24386 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP24386 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.09■□□□□ 0.81
CHMP24386 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.09■□□□□ 0.81
CHMP24386 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP24386 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP24386 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP24386 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.09■□□□□ 0.81
CHMP24386 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.09■□□□□ 0.81
CHMP24386 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.09■□□□□ 0.81
CHMP24386 SLC25A24-204ENST00000569674 2357 ntBASIC20.09■□□□□ 0.81
CHMP24386 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CHMP24386 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP24386 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP24386 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CHMP24386 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
CHMP24386 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.08■□□□□ 0.81
CHMP24386 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP24386 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP24386 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.08■□□□□ 0.81
CHMP24386 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP24386 AC133637.1-201ENST00000624115 1537 ntBASIC20.08■□□□□ 0.81
CHMP24386 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.08■□□□□ 0.81
CHMP24386 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP24386 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP24386 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP24386 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP24386 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.08■□□□□ 0.81
CHMP24386 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP24386 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.08■□□□□ 0.81
CHMP24386 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.08■□□□□ 0.81
CHMP24386 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.08■□□□□ 0.8
CHMP24386 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHMP24386 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHMP24386 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CHMP24386 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CHMP24386 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHMP24386 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP24386 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.07■□□□□ 0.8
CHMP24386 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP24386 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CHMP24386 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP24386 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP24386 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP24386 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.07■□□□□ 0.8
CHMP24386 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP24386 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP24386 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms