Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
USP1O94782 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
USP1O94782 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
USP1O94782 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP1O94782 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.82■■□□□ 1.08
USP1O94782 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP1O94782 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.82■■□□□ 1.08
USP1O94782 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP1O94782 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP1O94782 OR2I1P-207ENST00000453522 948 ntBASIC21.82■■□□□ 1.08
USP1O94782 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
USP1O94782 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP1O94782 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
USP1O94782 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP1O94782 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.82■■□□□ 1.08
USP1O94782 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP1O94782 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP1O94782 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.81■■□□□ 1.08
USP1O94782 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP1O94782 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP1O94782 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
USP1O94782 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP1O94782 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP1O94782 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
USP1O94782 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
USP1O94782 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.81■■□□□ 1.08
USP1O94782 AC079089.2-201ENST00000531211 1277 ntBASIC21.81■■□□□ 1.08
USP1O94782 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
USP1O94782 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.81■■□□□ 1.08
USP1O94782 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.81■■□□□ 1.08
USP1O94782 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.81■■□□□ 1.08
USP1O94782 AC068587.7-201ENST00000641602 218 ntBASIC21.81■■□□□ 1.08
USP1O94782 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP1O94782 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP1O94782 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP1O94782 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP1O94782 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.8■■□□□ 1.08
USP1O94782 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP1O94782 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP1O94782 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP1O94782 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP1O94782 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
USP1O94782 FAM99A-202ENST00000538190 1989 ntBASIC21.8■■□□□ 1.08
USP1O94782 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.8■■□□□ 1.08
USP1O94782 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.8■■□□□ 1.08
USP1O94782 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.8■■□□□ 1.08
USP1O94782 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP1O94782 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.8■■□□□ 1.08
USP1O94782 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP1O94782 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
USP1O94782 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP1O94782 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP1O94782 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP1O94782 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
USP1O94782 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
USP1O94782 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.8■■□□□ 1.08
USP1O94782 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP1O94782 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP1O94782 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP1O94782 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.79■■□□□ 1.08
USP1O94782 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP1O94782 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.79■■□□□ 1.08
USP1O94782 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
USP1O94782 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP1O94782 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
USP1O94782 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP1O94782 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.79■■□□□ 1.08
USP1O94782 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.79■■□□□ 1.08
USP1O94782 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
USP1O94782 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.79■■□□□ 1.08
USP1O94782 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP1O94782 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
USP1O94782 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP1O94782 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP1O94782 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.78■■□□□ 1.08
USP1O94782 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
USP1O94782 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
USP1O94782 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.78■■□□□ 1.08
USP1O94782 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
USP1O94782 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
USP1O94782 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP1O94782 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP1O94782 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
USP1O94782 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.78■■□□□ 1.08
USP1O94782 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
USP1O94782 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
USP1O94782 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
USP1O94782 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
USP1O94782 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
USP1O94782 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP1O94782 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
USP1O94782 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
USP1O94782 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
USP1O94782 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP1O94782 AC008406.3-201ENST00000620001 1374 ntBASIC21.77■■□□□ 1.08
USP1O94782 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP1O94782 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.77■■□□□ 1.08
USP1O94782 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USP1O94782 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.77■■□□□ 1.08
USP1O94782 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms