Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 AC093536.1-201ENST00000569153 554 ntBASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RBFOX3A6NFN3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RBFOX3A6NFN3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RBFOX3A6NFN3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RBFOX3A6NFN3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RBFOX3A6NFN3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RBFOX3A6NFN3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RBFOX3A6NFN3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RBFOX3A6NFN3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RBFOX3A6NFN3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RBFOX3A6NFN3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RBFOX3A6NFN3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.04■□□□□ 0.32
RBFOX3A6NFN3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.04■□□□□ 0.32
RBFOX3A6NFN3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RBFOX3A6NFN3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RBFOX3A6NFN3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RBFOX3A6NFN3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RBFOX3A6NFN3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RBFOX3A6NFN3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RBFOX3A6NFN3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RBFOX3A6NFN3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RBFOX3A6NFN3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RBFOX3A6NFN3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RBFOX3A6NFN3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RBFOX3A6NFN3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RBFOX3A6NFN3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RBFOX3A6NFN3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RBFOX3A6NFN3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RBFOX3A6NFN3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RBFOX3A6NFN3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RBFOX3A6NFN3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RBFOX3A6NFN3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RBFOX3A6NFN3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RBFOX3A6NFN3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RBFOX3A6NFN3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.02■□□□□ 0.32
RBFOX3A6NFN3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RBFOX3A6NFN3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RBFOX3A6NFN3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RBFOX3A6NFN3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RBFOX3A6NFN3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RBFOX3A6NFN3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RBFOX3A6NFN3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RBFOX3A6NFN3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RBFOX3A6NFN3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
RBFOX3A6NFN3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RBFOX3A6NFN3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RBFOX3A6NFN3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
RBFOX3A6NFN3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RBFOX3A6NFN3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RBFOX3A6NFN3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RBFOX3A6NFN3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
RBFOX3A6NFN3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RBFOX3A6NFN3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.02■□□□□ 0.31
RBFOX3A6NFN3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.02■□□□□ 0.31
RBFOX3A6NFN3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RBFOX3A6NFN3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RBFOX3A6NFN3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RBFOX3A6NFN3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RBFOX3A6NFN3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RBFOX3A6NFN3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RBFOX3A6NFN3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.01■□□□□ 0.31
RBFOX3A6NFN3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RBFOX3A6NFN3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RBFOX3A6NFN3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.01■□□□□ 0.31
RBFOX3A6NFN3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RBFOX3A6NFN3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
RBFOX3A6NFN3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RBFOX3A6NFN3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RBFOX3A6NFN3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RBFOX3A6NFN3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.01■□□□□ 0.31
RBFOX3A6NFN3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RBFOX3A6NFN3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
RBFOX3A6NFN3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RBFOX3A6NFN3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RBFOX3A6NFN3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RBFOX3A6NFN3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RBFOX3A6NFN3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17■□□□□ 0.31
RBFOX3A6NFN3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RBFOX3A6NFN3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RBFOX3A6NFN3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms