Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27.56■■■□□ 2
NCDNQ9UBB6 DUX4L29-201ENST00000425409 679 ntBASIC27.55■■■□□ 2
NCDNQ9UBB6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
NCDNQ9UBB6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.53■■■□□ 2
NCDNQ9UBB6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.53■■■□□ 2
NCDNQ9UBB6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
NCDNQ9UBB6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.52■■■□□ 2
NCDNQ9UBB6 HSD17B1P1-201ENST00000590052 955 ntBASIC27.52■■■□□ 2
NCDNQ9UBB6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
NCDNQ9UBB6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.51■■□□□ 1.99
NCDNQ9UBB6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
NCDNQ9UBB6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
NCDNQ9UBB6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
NCDNQ9UBB6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.48■■□□□ 1.99
NCDNQ9UBB6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.47■■□□□ 1.99
NCDNQ9UBB6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.47■■□□□ 1.99
NCDNQ9UBB6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.47■■□□□ 1.99
NCDNQ9UBB6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.98
NCDNQ9UBB6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.45■■□□□ 1.98
NCDNQ9UBB6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
NCDNQ9UBB6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
NCDNQ9UBB6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
NCDNQ9UBB6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.39■■□□□ 1.98
NCDNQ9UBB6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.38■■□□□ 1.97
NCDNQ9UBB6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
NCDNQ9UBB6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.37■■□□□ 1.97
NCDNQ9UBB6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
NCDNQ9UBB6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
NCDNQ9UBB6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.36■■□□□ 1.97
NCDNQ9UBB6 AC016575.1-201ENST00000607026 382 ntBASIC27.35■■□□□ 1.97
NCDNQ9UBB6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
NCDNQ9UBB6 AC021231.2-201ENST00000594613 730 ntBASIC27.32■■□□□ 1.96
NCDNQ9UBB6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.32■■□□□ 1.96
NCDNQ9UBB6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
NCDNQ9UBB6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.31■■□□□ 1.96
NCDNQ9UBB6 MIR3648-2-201ENST00000581792 180 ntBASIC27.31■■□□□ 1.96
NCDNQ9UBB6 MIR3648-1-201ENST00000615959 180 ntBASIC27.31■■□□□ 1.96
NCDNQ9UBB6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.31■■□□□ 1.96
NCDNQ9UBB6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC27.3■■□□□ 1.96
NCDNQ9UBB6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.3■■□□□ 1.96
NCDNQ9UBB6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NCDNQ9UBB6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
NCDNQ9UBB6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
NCDNQ9UBB6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.27■■□□□ 1.96
NCDNQ9UBB6 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.26■■□□□ 1.95
NCDNQ9UBB6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.26■■□□□ 1.95
NCDNQ9UBB6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.24■■□□□ 1.95
NCDNQ9UBB6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
NCDNQ9UBB6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
NCDNQ9UBB6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.23■■□□□ 1.95
NCDNQ9UBB6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
NCDNQ9UBB6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
NCDNQ9UBB6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.21■■□□□ 1.95
NCDNQ9UBB6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
NCDNQ9UBB6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
NCDNQ9UBB6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
NCDNQ9UBB6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
NCDNQ9UBB6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.19■■□□□ 1.94
NCDNQ9UBB6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
NCDNQ9UBB6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
NCDNQ9UBB6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.18■■□□□ 1.94
NCDNQ9UBB6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
NCDNQ9UBB6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.17■■□□□ 1.94
NCDNQ9UBB6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
NCDNQ9UBB6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC27.15■■□□□ 1.94
NCDNQ9UBB6 WASH5P-204ENST00000632292 975 ntBASIC27.15■■□□□ 1.94
NCDNQ9UBB6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.15■■□□□ 1.94
NCDNQ9UBB6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
NCDNQ9UBB6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
NCDNQ9UBB6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC27.12■■□□□ 1.93
NCDNQ9UBB6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.12■■□□□ 1.93
NCDNQ9UBB6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
NCDNQ9UBB6 DUX4L11-201ENST00000611504 1267 ntBASIC27.11■■□□□ 1.93
NCDNQ9UBB6 DUX4L12-201ENST00000614593 1267 ntBASIC27.11■■□□□ 1.93
NCDNQ9UBB6 DUX4L14-201ENST00000621227 1267 ntBASIC27.11■■□□□ 1.93
NCDNQ9UBB6 CR559946.2-201ENST00000623684 991 ntBASIC27.11■■□□□ 1.93
NCDNQ9UBB6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.1■■□□□ 1.93
NCDNQ9UBB6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
NCDNQ9UBB6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
NCDNQ9UBB6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
NCDNQ9UBB6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC27.09■■□□□ 1.93
NCDNQ9UBB6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.09■■□□□ 1.93
NCDNQ9UBB6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
NCDNQ9UBB6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
NCDNQ9UBB6 LINC01971-201ENST00000617888 1048 ntBASIC27.06■■□□□ 1.92
NCDNQ9UBB6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
NCDNQ9UBB6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
NCDNQ9UBB6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.03■■□□□ 1.92
NCDNQ9UBB6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.03■■□□□ 1.92
NCDNQ9UBB6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.03■■□□□ 1.92
NCDNQ9UBB6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
NCDNQ9UBB6 AC108673.1-201ENST00000510422 1159 ntBASIC27.02■■□□□ 1.92
NCDNQ9UBB6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
NCDNQ9UBB6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
NCDNQ9UBB6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.01■■□□□ 1.91
NCDNQ9UBB6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
NCDNQ9UBB6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
NCDNQ9UBB6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27■■□□□ 1.91
NCDNQ9UBB6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27■■□□□ 1.91
NCDNQ9UBB6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.99■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms