Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC16.39■□□□□ 0.21
CYSTM1Q9H1C7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC16.38■□□□□ 0.21
CYSTM1Q9H1C7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CYSTM1Q9H1C7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CYSTM1Q9H1C7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CYSTM1Q9H1C7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CYSTM1Q9H1C7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
CYSTM1Q9H1C7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CYSTM1Q9H1C7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CYSTM1Q9H1C7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CYSTM1Q9H1C7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CYSTM1Q9H1C7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CYSTM1Q9H1C7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CYSTM1Q9H1C7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CYSTM1Q9H1C7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CYSTM1Q9H1C7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC16.33■□□□□ 0.2
CYSTM1Q9H1C7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC16.33■□□□□ 0.2
CYSTM1Q9H1C7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CYSTM1Q9H1C7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC16.32■□□□□ 0.2
CYSTM1Q9H1C7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.32■□□□□ 0.2
CYSTM1Q9H1C7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYSTM1Q9H1C7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYSTM1Q9H1C7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC16.3■□□□□ 0.2
CYSTM1Q9H1C7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CYSTM1Q9H1C7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CYSTM1Q9H1C7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC16.3■□□□□ 0.2
CYSTM1Q9H1C7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CYSTM1Q9H1C7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CYSTM1Q9H1C7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CYSTM1Q9H1C7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CYSTM1Q9H1C7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CYSTM1Q9H1C7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CYSTM1Q9H1C7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CYSTM1Q9H1C7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
CYSTM1Q9H1C7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CYSTM1Q9H1C7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CYSTM1Q9H1C7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CYSTM1Q9H1C7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CYSTM1Q9H1C7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CYSTM1Q9H1C7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CYSTM1Q9H1C7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CYSTM1Q9H1C7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CYSTM1Q9H1C7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CYSTM1Q9H1C7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CYSTM1Q9H1C7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CYSTM1Q9H1C7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CYSTM1Q9H1C7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CYSTM1Q9H1C7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CYSTM1Q9H1C7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CYSTM1Q9H1C7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CYSTM1Q9H1C7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CYSTM1Q9H1C7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CYSTM1Q9H1C7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CYSTM1Q9H1C7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CYSTM1Q9H1C7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYSTM1Q9H1C7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYSTM1Q9H1C7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYSTM1Q9H1C7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYSTM1Q9H1C7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYSTM1Q9H1C7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CYSTM1Q9H1C7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
CYSTM1Q9H1C7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CYSTM1Q9H1C7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CYSTM1Q9H1C7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYSTM1Q9H1C7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CYSTM1Q9H1C7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CYSTM1Q9H1C7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYSTM1Q9H1C7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CYSTM1Q9H1C7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CYSTM1Q9H1C7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CYSTM1Q9H1C7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC16.15■□□□□ 0.18
CYSTM1Q9H1C7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYSTM1Q9H1C7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CYSTM1Q9H1C7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYSTM1Q9H1C7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC16.14■□□□□ 0.17
CYSTM1Q9H1C7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC16.14■□□□□ 0.17
CYSTM1Q9H1C7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYSTM1Q9H1C7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYSTM1Q9H1C7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYSTM1Q9H1C7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYSTM1Q9H1C7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC16.11■□□□□ 0.17
CYSTM1Q9H1C7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CYSTM1Q9H1C7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYSTM1Q9H1C7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYSTM1Q9H1C7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC16.1■□□□□ 0.17
CYSTM1Q9H1C7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYSTM1Q9H1C7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CYSTM1Q9H1C7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC16.1■□□□□ 0.17
CYSTM1Q9H1C7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.09■□□□□ 0.17
CYSTM1Q9H1C7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CYSTM1Q9H1C7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CYSTM1Q9H1C7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CYSTM1Q9H1C7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CYSTM1Q9H1C7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CYSTM1Q9H1C7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CYSTM1Q9H1C7 AL121749.1-202ENST00000609313 2153 ntBASIC16.08■□□□□ 0.16
CYSTM1Q9H1C7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CYSTM1Q9H1C7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYSTM1Q9H1C7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CYSTM1Q9H1C7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms