Protein–RNA interactions for Protein: Q9H158

PCDHAC1, Protocadherin alpha-C1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1Q9H158 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHAC1Q9H158 AC006077.2-201ENST00000623591 457 ntBASIC25.87■■□□□ 1.73
PCDHAC1Q9H158 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
PCDHAC1Q9H158 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHAC1Q9H158 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHAC1Q9H158 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.83■■□□□ 1.73
PCDHAC1Q9H158 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHAC1Q9H158 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHAC1Q9H158 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC25.83■■□□□ 1.73
PCDHAC1Q9H158 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHAC1Q9H158 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.82■■□□□ 1.72
PCDHAC1Q9H158 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHAC1Q9H158 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHAC1Q9H158 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
PCDHAC1Q9H158 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHAC1Q9H158 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.79■■□□□ 1.72
PCDHAC1Q9H158 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.79■■□□□ 1.72
PCDHAC1Q9H158 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHAC1Q9H158 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHAC1Q9H158 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHAC1Q9H158 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHAC1Q9H158 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHAC1Q9H158 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.72
PCDHAC1Q9H158 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHAC1Q9H158 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHAC1Q9H158 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHAC1Q9H158 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHAC1Q9H158 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHAC1Q9H158 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHAC1Q9H158 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
PCDHAC1Q9H158 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
PCDHAC1Q9H158 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PCDHAC1Q9H158 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
PCDHAC1Q9H158 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHAC1Q9H158 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHAC1Q9H158 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHAC1Q9H158 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.64■■□□□ 1.7
PCDHAC1Q9H158 ZNRF2P1-201ENST00000441407 443 ntBASIC25.64■■□□□ 1.7
PCDHAC1Q9H158 ST7-AS1-201ENST00000456775 1889 ntBASIC25.63■■□□□ 1.69
PCDHAC1Q9H158 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHAC1Q9H158 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.62■■□□□ 1.69
PCDHAC1Q9H158 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC25.62■■□□□ 1.69
PCDHAC1Q9H158 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
PCDHAC1Q9H158 AL161658.1-201ENST00000623641 1967 ntBASIC25.62■■□□□ 1.69
PCDHAC1Q9H158 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
PCDHAC1Q9H158 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.61■■□□□ 1.69
PCDHAC1Q9H158 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHAC1Q9H158 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHAC1Q9H158 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHAC1Q9H158 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHAC1Q9H158 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHAC1Q9H158 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
PCDHAC1Q9H158 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHAC1Q9H158 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHAC1Q9H158 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHAC1Q9H158 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHAC1Q9H158 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHAC1Q9H158 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHAC1Q9H158 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHAC1Q9H158 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.55■■□□□ 1.68
PCDHAC1Q9H158 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
PCDHAC1Q9H158 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHAC1Q9H158 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC25.54■■□□□ 1.68
PCDHAC1Q9H158 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHAC1Q9H158 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC25.53■■□□□ 1.68
PCDHAC1Q9H158 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHAC1Q9H158 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
PCDHAC1Q9H158 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHAC1Q9H158 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHAC1Q9H158 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.51■■□□□ 1.67
PCDHAC1Q9H158 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHAC1Q9H158 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
PCDHAC1Q9H158 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHAC1Q9H158 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDHAC1Q9H158 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHAC1Q9H158 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHAC1Q9H158 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHAC1Q9H158 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHAC1Q9H158 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHAC1Q9H158 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC25.47■■□□□ 1.67
PCDHAC1Q9H158 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.47■■□□□ 1.67
PCDHAC1Q9H158 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
PCDHAC1Q9H158 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHAC1Q9H158 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.47■■□□□ 1.67
PCDHAC1Q9H158 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHAC1Q9H158 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHAC1Q9H158 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHAC1Q9H158 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHAC1Q9H158 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHAC1Q9H158 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHAC1Q9H158 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHAC1Q9H158 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHAC1Q9H158 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
PCDHAC1Q9H158 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHAC1Q9H158 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.41■■□□□ 1.66
PCDHAC1Q9H158 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHAC1Q9H158 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.4■■□□□ 1.66
PCDHAC1Q9H158 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHAC1Q9H158 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHAC1Q9H158 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.39■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms