Protein–RNA interactions for Protein: Q9H0X6

RNF208, RING finger protein 208, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF208Q9H0X6 DUX4L29-201ENST00000425409 679 ntBASIC31.27■■■□□ 2.6
RNF208Q9H0X6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.27■■■□□ 2.6
RNF208Q9H0X6 MIR639-201ENST00000384974 98 ntBASIC31.26■■■□□ 2.59
RNF208Q9H0X6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.25■■■□□ 2.59
RNF208Q9H0X6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.25■■■□□ 2.59
RNF208Q9H0X6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RNF208Q9H0X6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.23■■■□□ 2.59
RNF208Q9H0X6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RNF208Q9H0X6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
RNF208Q9H0X6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RNF208Q9H0X6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
RNF208Q9H0X6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
RNF208Q9H0X6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
RNF208Q9H0X6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RNF208Q9H0X6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.18■■■□□ 2.58
RNF208Q9H0X6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RNF208Q9H0X6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.16■■■□□ 2.58
RNF208Q9H0X6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.15■■■□□ 2.58
RNF208Q9H0X6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.14■■■□□ 2.58
RNF208Q9H0X6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
RNF208Q9H0X6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.12■■■□□ 2.57
RNF208Q9H0X6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
RNF208Q9H0X6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
RNF208Q9H0X6 HSD17B1P1-201ENST00000590052 955 ntBASIC31.11■■■□□ 2.57
RNF208Q9H0X6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
RNF208Q9H0X6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RNF208Q9H0X6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.1■■■□□ 2.57
RNF208Q9H0X6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.08■■■□□ 2.57
RNF208Q9H0X6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.07■■■□□ 2.56
RNF208Q9H0X6 AC021231.2-201ENST00000594613 730 ntBASIC31.07■■■□□ 2.56
RNF208Q9H0X6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RNF208Q9H0X6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RNF208Q9H0X6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.05■■■□□ 2.56
RNF208Q9H0X6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.04■■■□□ 2.56
RNF208Q9H0X6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
RNF208Q9H0X6 AC016575.1-201ENST00000607026 382 ntBASIC31.03■■■□□ 2.56
RNF208Q9H0X6 WASH5P-204ENST00000632292 975 ntBASIC31.03■■■□□ 2.56
RNF208Q9H0X6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
RNF208Q9H0X6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
RNF208Q9H0X6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
RNF208Q9H0X6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.01■■■□□ 2.55
RNF208Q9H0X6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.01■■■□□ 2.55
RNF208Q9H0X6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.01■■■□□ 2.55
RNF208Q9H0X6 MIR3648-2-201ENST00000581792 180 ntBASIC31.01■■■□□ 2.55
RNF208Q9H0X6 MIR3648-1-201ENST00000615959 180 ntBASIC31.01■■■□□ 2.55
RNF208Q9H0X6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.01■■■□□ 2.55
RNF208Q9H0X6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
RNF208Q9H0X6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
RNF208Q9H0X6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.99■■■□□ 2.55
RNF208Q9H0X6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.99■■■□□ 2.55
RNF208Q9H0X6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.96■■■□□ 2.55
RNF208Q9H0X6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
RNF208Q9H0X6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
RNF208Q9H0X6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
RNF208Q9H0X6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
RNF208Q9H0X6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.91■■■□□ 2.54
RNF208Q9H0X6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
RNF208Q9H0X6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
RNF208Q9H0X6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.9■■■□□ 2.54
RNF208Q9H0X6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
RNF208Q9H0X6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
RNF208Q9H0X6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
RNF208Q9H0X6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
RNF208Q9H0X6 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.84■■■□□ 2.53
RNF208Q9H0X6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
RNF208Q9H0X6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
RNF208Q9H0X6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.82■■■□□ 2.52
RNF208Q9H0X6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.82■■■□□ 2.52
RNF208Q9H0X6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
RNF208Q9H0X6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.8■■■□□ 2.52
RNF208Q9H0X6 DUX4L11-201ENST00000611504 1267 ntBASIC30.8■■■□□ 2.52
RNF208Q9H0X6 DUX4L12-201ENST00000614593 1267 ntBASIC30.8■■■□□ 2.52
RNF208Q9H0X6 DUX4L14-201ENST00000621227 1267 ntBASIC30.8■■■□□ 2.52
RNF208Q9H0X6 CR559946.2-201ENST00000623684 991 ntBASIC30.8■■■□□ 2.52
RNF208Q9H0X6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.8■■■□□ 2.52
RNF208Q9H0X6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
RNF208Q9H0X6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
RNF208Q9H0X6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
RNF208Q9H0X6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.77■■■□□ 2.52
RNF208Q9H0X6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
RNF208Q9H0X6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.76■■■□□ 2.51
RNF208Q9H0X6 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
RNF208Q9H0X6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RNF208Q9H0X6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RNF208Q9H0X6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
RNF208Q9H0X6 AC108673.1-201ENST00000510422 1159 ntBASIC30.74■■■□□ 2.51
RNF208Q9H0X6 LINC01971-201ENST00000617888 1048 ntBASIC30.74■■■□□ 2.51
RNF208Q9H0X6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.73■■■□□ 2.51
RNF208Q9H0X6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.73■■■□□ 2.51
RNF208Q9H0X6 MIR6090-201ENST00000622481 60 ntBASIC30.73■■■□□ 2.51
RNF208Q9H0X6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
RNF208Q9H0X6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
RNF208Q9H0X6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
RNF208Q9H0X6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
RNF208Q9H0X6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.69■■■□□ 2.5
RNF208Q9H0X6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
RNF208Q9H0X6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.67■■■□□ 2.5
RNF208Q9H0X6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.67■■■□□ 2.5
RNF208Q9H0X6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
RNF208Q9H0X6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms