Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 WDR45-215ENST00000465806 2610 ntTSL 212.9□□□□□ -0.343e-10■■■■■ 57.7
XRN2Q9H0D6 SEMA4C-206ENST00000482925 3776 ntTSL 212.84□□□□□ -0.357e-7■■■■■ 57.7
XRN2Q9H0D6 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.363e-10■■■■■ 57.7
XRN2Q9H0D6 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.423e-10■■■■■ 57.7
XRN2Q9H0D6 WWP2-206ENST00000563659 561 ntTSL 412.06□□□□□ -0.483e-10■■■■■ 57.7
XRN2Q9H0D6 WWP2-204ENST00000561780 574 ntTSL 411.74□□□□□ -0.533e-10■■■■■ 57.7
XRN2Q9H0D6 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.861e-28■■■■■ 57.7
XRN2Q9H0D6 ZNF557-202ENST00000414706 5736 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.883e-10■■■■■ 57.7
XRN2Q9H0D6 CAPN13-202ENST00000450650 2328 ntTSL 29.33□□□□□ -0.923e-10■■■■■ 57.7
XRN2Q9H0D6 EHMT1-224ENST00000630754 709 ntTSL 323.43■■□□□ 1.344e-7■■■■■ 57.6
XRN2Q9H0D6 EHMT1-243ENST00000637593 100 ntTSL 521.32■■□□□ 14e-7■■■■■ 57.6
XRN2Q9H0D6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.75■□□□□ 0.754e-7■■■■■ 57.6
XRN2Q9H0D6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.54e-7■■■■■ 57.6
XRN2Q9H0D6 EHMT1-220ENST00000626216 558 ntTSL 316.5■□□□□ 0.234e-7■■■■■ 57.6
XRN2Q9H0D6 EHMT1-201ENST00000371394 2679 ntTSL 214.45□□□□□ -0.14e-7■■■■■ 57.6
XRN2Q9H0D6 AL590627.2-202ENST00000636318 138 ntTSL 514.13□□□□□ -0.154e-7■■■■■ 57.6
XRN2Q9H0D6 EHMT1-221ENST00000629335 3600 ntTSL 5 BASIC12.3□□□□□ -0.444e-7■■■■■ 57.6
XRN2Q9H0D6 ABRAXAS1-203ENST00000503217 595 ntTSL 428.89■■■□□ 2.226e-7■■■■■ 57.5
XRN2Q9H0D6 ABRAXAS1-207ENST00000511801 682 ntTSL 318.1■□□□□ 0.496e-7■■■■■ 57.5
XRN2Q9H0D6 ABRAXAS1-202ENST00000475656 2718 ntTSL 213.6□□□□□ -0.236e-7■■■■■ 57.5
XRN2Q9H0D6 ABRAXAS1-208ENST00000515303 1732 ntTSL 1 (best) BASIC11.94□□□□□ -0.56e-7■■■■■ 57.5
XRN2Q9H0D6 ABRAXAS1-206ENST00000506553 1869 ntTSL 5 BASIC9.6□□□□□ -0.876e-7■■■■■ 57.5
XRN2Q9H0D6 ABRAXAS1-201ENST00000321945 4291 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.026e-7■■■■■ 57.5
XRN2Q9H0D6 ABRAXAS1-205ENST00000505489 847 ntTSL 55.47□□□□□ -1.536e-7■■■■■ 57.5
XRN2Q9H0D6 NCOA5-202ENST00000372291 727 ntTSL 329.21■■■□□ 2.279e-8■■■■■ 57.1
XRN2Q9H0D6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.249e-8■■■■■ 57.1
XRN2Q9H0D6 STON2-201ENST00000267540 2977 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.972e-15■■■■■ 57
XRN2Q9H0D6 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.152e-15■■■■■ 57
XRN2Q9H0D6 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.212e-15■■■■■ 57
XRN2Q9H0D6 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.328e-8■■■■■ 56.5
XRN2Q9H0D6 RAP1GAP-202ENST00000317967 600 ntTSL 218.82■□□□□ 0.64e-8■■■■■ 56.4
XRN2Q9H0D6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.641e-8■■■■■ 56.1
XRN2Q9H0D6 RBMS1-206ENST00000428519 583 ntTSL 411.09□□□□□ -0.632e-7■■■■■ 56.1
XRN2Q9H0D6 RBMS1-204ENST00000409289 1490 ntTSL 5 BASIC9.54□□□□□ -0.882e-7■■■■■ 56.1
XRN2Q9H0D6 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.71□□□□□ -1.52e-7■■■■■ 56.1
XRN2Q9H0D6 ABCF2-203ENST00000441774 941 ntTSL 324.11■■□□□ 1.453e-9■■■■■ 55.9
XRN2Q9H0D6 TMEM18-205ENST00000432667 2572 ntTSL 514.62□□□□□ -0.071e-9■■■■■ 55.9
XRN2Q9H0D6 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC13.38□□□□□ -0.273e-9■■■■■ 55.9
XRN2Q9H0D6 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.581e-9■■■■■ 55.9
XRN2Q9H0D6 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.13e-9■■■■■ 55.9
XRN2Q9H0D6 RTEL1-210ENST00000496816 2222 ntTSL 1 (best)19.5■□□□□ 0.712e-11■■■■■ 55.5
XRN2Q9H0D6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.78■□□□□ 0.62e-11■■■■■ 55.5
XRN2Q9H0D6 RTEL1-TNFRSF6B-204ENST00000496281 5314 ntTSL 218.01■□□□□ 0.472e-11■■■■■ 55.5
XRN2Q9H0D6 RTEL1-TNFRSF6B-201ENST00000480273 5751 ntTSL 216.95■□□□□ 0.32e-11■■■■■ 55.5
XRN2Q9H0D6 PCK1-202ENST00000467047 5074 ntTSL 1 (best)10.7□□□□□ -0.71e-6■■■■■ 55.5
XRN2Q9H0D6 PCK1-201ENST00000319441 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.721e-6■■■■■ 55.5
XRN2Q9H0D6 SMAD2-211ENST00000589877 527 ntTSL 320.29■□□□□ 0.841e-6■■■■■ 55
XRN2Q9H0D6 SMAD2-207ENST00000586514 828 ntTSL 519.27■□□□□ 0.681e-6■■■■■ 55
XRN2Q9H0D6 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.33■□□□□ 0.041e-6■■■■■ 55
XRN2Q9H0D6 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.43□□□□□ -0.11e-6■■■■■ 55
XRN2Q9H0D6 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.371e-6■■■■■ 55
XRN2Q9H0D6 LIME1-203ENST00000465591 680 ntTSL 225.95■■□□□ 1.744e-7■■■■■ 54.9
XRN2Q9H0D6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.357e-7■■■■■ 54.9
XRN2Q9H0D6 LIME1-210ENST00000621325 2410 ntTSL 221.73■■□□□ 1.077e-7■■■■■ 54.9
XRN2Q9H0D6 LIME1-202ENST00000444951 451 ntAPPRIS ALT2 TSL 320■□□□□ 0.794e-7■■■■■ 54.9
XRN2Q9H0D6 PKNOX1-202ENST00000418336 459 ntTSL 224.37■■□□□ 1.495e-9■■■■■ 54.8
XRN2Q9H0D6 PKNOX1-206ENST00000480179 1725 ntTSL 215.41■□□□□ 0.065e-9■■■■■ 54.8
XRN2Q9H0D6 PKNOX1-201ENST00000291547 5003 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.735e-9■■■■■ 54.8
XRN2Q9H0D6 PKNOX1-203ENST00000432907 5180 ntTSL 2 BASIC9.96□□□□□ -0.825e-9■■■■■ 54.8
XRN2Q9H0D6 ZNF862-202ENST00000460379 594 ntTSL 415.52■□□□□ 0.083e-12■■■■■ 54.4
XRN2Q9H0D6 ZNF862-206ENST00000489820 554 ntTSL 413.66□□□□□ -0.223e-12■■■■■ 54.4
XRN2Q9H0D6 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.313e-12■■■■■ 54.4
XRN2Q9H0D6 CTBP2-206ENST00000460976 603 ntTSL 531.64■■■□□ 2.661e-9■■■■■ 54.1
XRN2Q9H0D6 CTBP2-207ENST00000467395 410 ntTSL 328.31■■■□□ 2.121e-9■■■■■ 54.1
XRN2Q9H0D6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.82■■□□□ 1.881e-9■■■■■ 54.1
XRN2Q9H0D6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.881e-9■■■■■ 54.1
XRN2Q9H0D6 TFPT-204ENST00000420715 737 ntTSL 526.82■■□□□ 1.881e-9■■■■■ 54.1
XRN2Q9H0D6 PSEN1-225ENST00000560005 699 ntTSL 325.27■■□□□ 1.641e-9■■■■■ 54.1
XRN2Q9H0D6 CTBP2-208ENST00000476817 705 ntTSL 324.98■■□□□ 1.591e-9■■■■■ 54.1
XRN2Q9H0D6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.71■■□□□ 1.551e-9■■■■■ 54.1
XRN2Q9H0D6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.531e-9■■■■■ 54.1
XRN2Q9H0D6 AC092118.2-201ENST00000613495 667 ntBASIC24.33■■□□□ 1.491e-9■■■■■ 54.1
XRN2Q9H0D6 RALA-205ENST00000468201 705 ntTSL 421.91■■□□□ 1.11e-9■■■■■ 54.1
XRN2Q9H0D6 PSEN1-207ENST00000553599 591 ntTSL 421.84■■□□□ 1.091e-9■■■■■ 54.1
XRN2Q9H0D6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.84■■□□□ 1.091e-9■■■■■ 54.1
XRN2Q9H0D6 RALA-203ENST00000436179 882 ntTSL 221.76■■□□□ 1.071e-9■■■■■ 54.1
XRN2Q9H0D6 PSEN1-210ENST00000554131 591 ntTSL 320.96■□□□□ 0.951e-9■■■■■ 54.1
XRN2Q9H0D6 PSEN1-208ENST00000553719 712 ntTSL 220.4■□□□□ 0.861e-9■■■■■ 54.1
XRN2Q9H0D6 PSEN1-224ENST00000559361 795 ntTSL 520.36■□□□□ 0.851e-9■■■■■ 54.1
XRN2Q9H0D6 SFSWAP-205ENST00000537164 961 ntTSL 520.34■□□□□ 0.851e-9■■■■■ 54.1
XRN2Q9H0D6 PSEN1-218ENST00000556864 574 ntTSL 520.04■□□□□ 0.81e-9■■■■■ 54.1
XRN2Q9H0D6 PSEN1-217ENST00000556533 550 ntTSL 519.89■□□□□ 0.771e-9■■■■■ 54.1
XRN2Q9H0D6 PSEN1-212ENST00000555254 754 ntTSL 319.89■□□□□ 0.771e-9■■■■■ 54.1
XRN2Q9H0D6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.761e-9■■■■■ 54.1
XRN2Q9H0D6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.741e-9■■■■■ 54.1
XRN2Q9H0D6 AC139149.1-201ENST00000430912 361 ntTSL 319.5■□□□□ 0.711e-9■■■■■ 54.1
XRN2Q9H0D6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.71e-9■■■■■ 54.1
XRN2Q9H0D6 PSEN1-206ENST00000553447 572 ntTSL 419.14■□□□□ 0.651e-9■■■■■ 54.1
XRN2Q9H0D6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.97■□□□□ 0.631e-9■■■■■ 54.1
XRN2Q9H0D6 AGPAT3-213ENST00000479117 1510 ntTSL 518.91■□□□□ 0.621e-9■■■■■ 54.1
XRN2Q9H0D6 ACVR2A-203ENST00000462659 746 ntTSL 318.91■□□□□ 0.621e-9■■■■■ 54.1
XRN2Q9H0D6 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.4■□□□□ 0.541e-9■■■■■ 54.1
XRN2Q9H0D6 SFSWAP-203ENST00000535236 5593 ntTSL 1 (best)18.34■□□□□ 0.531e-9■■■■■ 54.1
XRN2Q9H0D6 MIOX-204ENST00000451761 918 ntTSL 318.25■□□□□ 0.511e-9■■■■■ 54.1
XRN2Q9H0D6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.05■□□□□ 0.481e-9■■■■■ 54.1
XRN2Q9H0D6 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.471e-9■■■■■ 54.1
XRN2Q9H0D6 AGPAT3-214ENST00000481319 616 ntTSL 317.5■□□□□ 0.391e-9■■■■■ 54.1
XRN2Q9H0D6 ZBED1-204ENST00000461691 947 ntTSL 216.87■□□□□ 0.291e-9■■■■■ 54.1
XRN2Q9H0D6 ACVR2A-205ENST00000487959 274 ntTSL 416.45■□□□□ 0.221e-9■■■■■ 54.1
XRN2Q9H0D6 PSEN1-220ENST00000557037 555 ntTSL 416.16■□□□□ 0.181e-9■■■■■ 54.1
Retrieved 100 of 21,068 protein–RNA pairs in 272.6 ms