Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.15■■■□□ 2.74
PTPN18Q99952 RPS2-202ENST00000526522 924 ntTSL 2 BASIC32.15■■■□□ 2.74
PTPN18Q99952 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.15■■■□□ 2.74
PTPN18Q99952 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.15■■■□□ 2.74
PTPN18Q99952 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
PTPN18Q99952 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
PTPN18Q99952 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.14■■■□□ 2.74
PTPN18Q99952 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC32.13■■■□□ 2.73
PTPN18Q99952 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
PTPN18Q99952 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.12■■■□□ 2.73
PTPN18Q99952 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
PTPN18Q99952 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
PTPN18Q99952 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.1■■■□□ 2.73
PTPN18Q99952 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC32.1■■■□□ 2.73
PTPN18Q99952 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
PTPN18Q99952 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
PTPN18Q99952 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PTPN18Q99952 WASH5P-204ENST00000632292 975 ntBASIC32.05■■■□□ 2.72
PTPN18Q99952 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
PTPN18Q99952 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
PTPN18Q99952 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
PTPN18Q99952 MIR4449-201ENST00000578365 66 ntBASIC32.02■■■□□ 2.72
PTPN18Q99952 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
PTPN18Q99952 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
PTPN18Q99952 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
PTPN18Q99952 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
PTPN18Q99952 DUX4L29-201ENST00000425409 679 ntBASIC31.98■■■□□ 2.71
PTPN18Q99952 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PTPN18Q99952 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PTPN18Q99952 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PTPN18Q99952 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PTPN18Q99952 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
PTPN18Q99952 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
PTPN18Q99952 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.93■■■□□ 2.7
PTPN18Q99952 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
PTPN18Q99952 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.92■■■□□ 2.7
PTPN18Q99952 MIR639-201ENST00000384974 98 ntBASIC31.92■■■□□ 2.7
PTPN18Q99952 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
PTPN18Q99952 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.9■■■□□ 2.7
PTPN18Q99952 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PTPN18Q99952 AC021231.2-201ENST00000594613 730 ntBASIC31.89■■■□□ 2.7
PTPN18Q99952 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.88■■■□□ 2.69
PTPN18Q99952 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
PTPN18Q99952 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
PTPN18Q99952 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.86■■■□□ 2.69
PTPN18Q99952 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.84■■■□□ 2.69
PTPN18Q99952 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
PTPN18Q99952 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.83■■■□□ 2.69
PTPN18Q99952 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
PTPN18Q99952 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
PTPN18Q99952 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
PTPN18Q99952 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
PTPN18Q99952 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.8■■■□□ 2.68
PTPN18Q99952 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PTPN18Q99952 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PTPN18Q99952 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
PTPN18Q99952 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
PTPN18Q99952 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.77■■■□□ 2.68
PTPN18Q99952 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
PTPN18Q99952 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
PTPN18Q99952 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
PTPN18Q99952 MIR3648-2-201ENST00000581792 180 ntBASIC31.74■■■□□ 2.67
PTPN18Q99952 MIR3648-1-201ENST00000615959 180 ntBASIC31.74■■■□□ 2.67
PTPN18Q99952 AC016575.1-201ENST00000607026 382 ntBASIC31.73■■■□□ 2.67
PTPN18Q99952 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PTPN18Q99952 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PTPN18Q99952 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PTPN18Q99952 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PTPN18Q99952 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.71■■■□□ 2.67
PTPN18Q99952 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.71■■■□□ 2.67
PTPN18Q99952 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PTPN18Q99952 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PTPN18Q99952 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.7■■■□□ 2.67
PTPN18Q99952 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.7■■■□□ 2.67
PTPN18Q99952 HSD17B1P1-201ENST00000590052 955 ntBASIC31.69■■■□□ 2.66
PTPN18Q99952 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.68■■■□□ 2.66
PTPN18Q99952 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PTPN18Q99952 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PTPN18Q99952 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.66■■■□□ 2.66
PTPN18Q99952 MIR6090-201ENST00000622481 60 ntBASIC31.65■■■□□ 2.66
PTPN18Q99952 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PTPN18Q99952 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.63■■■□□ 2.65
PTPN18Q99952 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.61■■■□□ 2.65
PTPN18Q99952 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
PTPN18Q99952 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PTPN18Q99952 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.6■■■□□ 2.65
PTPN18Q99952 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
PTPN18Q99952 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.58■■■□□ 2.65
PTPN18Q99952 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PTPN18Q99952 CR559946.2-201ENST00000623684 991 ntBASIC31.57■■■□□ 2.64
PTPN18Q99952 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
PTPN18Q99952 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PTPN18Q99952 AC108673.1-201ENST00000510422 1159 ntBASIC31.56■■■□□ 2.64
PTPN18Q99952 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
PTPN18Q99952 DUX4L11-201ENST00000611504 1267 ntBASIC31.56■■■□□ 2.64
PTPN18Q99952 DUX4L12-201ENST00000614593 1267 ntBASIC31.56■■■□□ 2.64
PTPN18Q99952 DUX4L14-201ENST00000621227 1267 ntBASIC31.56■■■□□ 2.64
PTPN18Q99952 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.54■■■□□ 2.64
PTPN18Q99952 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PTPN18Q99952 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.53■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms