Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC40■■■■□ 3.99
SCAF11Q99590 HGH1-207ENST00000628266 258 ntTSL 5 BASIC40■■■■□ 3.99
SCAF11Q99590 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC39.99■■■■□ 3.99
SCAF11Q99590 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC39.98■■■■□ 3.99
SCAF11Q99590 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC39.98■■■■□ 3.99
SCAF11Q99590 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC39.96■■■■□ 3.99
SCAF11Q99590 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC39.94■■■■□ 3.98
SCAF11Q99590 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
SCAF11Q99590 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC39.94■■■■□ 3.98
SCAF11Q99590 RPS2-202ENST00000526522 924 ntTSL 2 BASIC39.94■■■■□ 3.98
SCAF11Q99590 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC39.93■■■■□ 3.98
SCAF11Q99590 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC39.92■■■■□ 3.98
SCAF11Q99590 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC39.92■■■■□ 3.98
SCAF11Q99590 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC39.9■■■■□ 3.98
SCAF11Q99590 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC39.9■■■■□ 3.98
SCAF11Q99590 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC39.88■■■■□ 3.98
SCAF11Q99590 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC39.88■■■■□ 3.97
SCAF11Q99590 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC39.87■■■■□ 3.97
SCAF11Q99590 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC39.87■■■■□ 3.97
SCAF11Q99590 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
SCAF11Q99590 MIR4449-201ENST00000578365 66 ntBASIC39.86■■■■□ 3.97
SCAF11Q99590 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC39.85■■■■□ 3.97
SCAF11Q99590 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC39.85■■■■□ 3.97
SCAF11Q99590 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC39.82■■■■□ 3.97
SCAF11Q99590 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC39.82■■■■□ 3.97
SCAF11Q99590 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC39.81■■■■□ 3.96
SCAF11Q99590 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC39.81■■■■□ 3.96
SCAF11Q99590 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC39.81■■■■□ 3.96
SCAF11Q99590 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC39.8■■■■□ 3.96
SCAF11Q99590 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC39.8■■■■□ 3.96
SCAF11Q99590 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
SCAF11Q99590 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.96
SCAF11Q99590 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC39.76■■■■□ 3.96
SCAF11Q99590 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC39.76■■■■□ 3.96
SCAF11Q99590 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC39.75■■■■□ 3.95
SCAF11Q99590 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
SCAF11Q99590 RPS2-209ENST00000529806 993 ntTSL 3 BASIC39.72■■■■□ 3.95
SCAF11Q99590 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC39.7■■■■□ 3.95
SCAF11Q99590 MACF1-219ENST00000484793 834 ntTSL 2 BASIC39.69■■■■□ 3.94
SCAF11Q99590 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
SCAF11Q99590 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC39.66■■■■□ 3.94
SCAF11Q99590 MIR639-201ENST00000384974 98 ntBASIC39.66■■■■□ 3.94
SCAF11Q99590 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
SCAF11Q99590 WASH5P-204ENST00000632292 975 ntBASIC39.63■■■■□ 3.94
SCAF11Q99590 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC39.62■■■■□ 3.93
SCAF11Q99590 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
SCAF11Q99590 DUX4L29-201ENST00000425409 679 ntBASIC39.62■■■■□ 3.93
SCAF11Q99590 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC39.61■■■■□ 3.93
SCAF11Q99590 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC39.59■■■■□ 3.93
SCAF11Q99590 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
SCAF11Q99590 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC39.58■■■■□ 3.93
SCAF11Q99590 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC39.56■■■■□ 3.92
SCAF11Q99590 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC39.56■■■■□ 3.92
SCAF11Q99590 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC39.56■■■■□ 3.92
SCAF11Q99590 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC39.55■■■■□ 3.92
SCAF11Q99590 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC39.54■■■■□ 3.92
SCAF11Q99590 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC39.53■■■■□ 3.92
SCAF11Q99590 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC39.53■■■■□ 3.92
SCAF11Q99590 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
SCAF11Q99590 HSD17B1P1-201ENST00000590052 955 ntBASIC39.5■■■■□ 3.91
SCAF11Q99590 AC021231.2-201ENST00000594613 730 ntBASIC39.49■■■■□ 3.91
SCAF11Q99590 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
SCAF11Q99590 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC39.48■■■■□ 3.91
SCAF11Q99590 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC39.47■■■■□ 3.91
SCAF11Q99590 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC39.47■■■■□ 3.91
SCAF11Q99590 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC39.46■■■■□ 3.91
SCAF11Q99590 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC39.45■■■■□ 3.91
SCAF11Q99590 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC39.45■■■■□ 3.91
SCAF11Q99590 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC39.41■■■■□ 3.9
SCAF11Q99590 RNF166-209ENST00000567844 633 ntTSL 5 BASIC39.41■■■■□ 3.9
SCAF11Q99590 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC39.39■■■■□ 3.9
SCAF11Q99590 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
SCAF11Q99590 MIR3648-2-201ENST00000581792 180 ntBASIC39.37■■■■□ 3.89
SCAF11Q99590 CALM3-209ENST00000597743 577 ntTSL 4 BASIC39.37■■■■□ 3.89
SCAF11Q99590 AC016575.1-201ENST00000607026 382 ntBASIC39.37■■■■□ 3.89
SCAF11Q99590 MIR3648-1-201ENST00000615959 180 ntBASIC39.37■■■■□ 3.89
SCAF11Q99590 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC39.36■■■■□ 3.89
SCAF11Q99590 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
SCAF11Q99590 GDI1-215ENST00000630693 786 ntTSL 4 BASIC39.35■■■■□ 3.89
SCAF11Q99590 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC39.34■■■■□ 3.89
SCAF11Q99590 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC39.33■■■■□ 3.89
SCAF11Q99590 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.89
SCAF11Q99590 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC39.32■■■■□ 3.88
SCAF11Q99590 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC39.32■■■■□ 3.88
SCAF11Q99590 BRD4-212ENST00000630599 726 ntTSL 2 BASIC39.31■■■■□ 3.88
SCAF11Q99590 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC39.3■■■■□ 3.88
SCAF11Q99590 CR559946.2-201ENST00000623684 991 ntBASIC39.29■■■■□ 3.88
SCAF11Q99590 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC39.29■■■■□ 3.88
SCAF11Q99590 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC39.27■■■■□ 3.88
SCAF11Q99590 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC39.26■■■■□ 3.88
SCAF11Q99590 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC39.25■■■■□ 3.87
SCAF11Q99590 CIB2-204ENST00000557846 934 ntTSL 3 BASIC39.24■■■■□ 3.87
SCAF11Q99590 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC39.23■■■■□ 3.87
SCAF11Q99590 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC39.22■■■■□ 3.87
SCAF11Q99590 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
SCAF11Q99590 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC39.22■■■■□ 3.87
SCAF11Q99590 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
SCAF11Q99590 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
SCAF11Q99590 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
SCAF11Q99590 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC39.19■■■■□ 3.86
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms