Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
DUX3Q96PT4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DUX3Q96PT4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC21.04■□□□□ 0.96
DUX3Q96PT4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DUX3Q96PT4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
DUX3Q96PT4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
DUX3Q96PT4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
DUX3Q96PT4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DUX3Q96PT4 AP006261.1-201ENST00000584783 668 ntBASIC21.01■□□□□ 0.95
DUX3Q96PT4 WASH5P-204ENST00000632292 975 ntBASIC21.01■□□□□ 0.95
DUX3Q96PT4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21■□□□□ 0.95
DUX3Q96PT4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
DUX3Q96PT4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.99■□□□□ 0.95
DUX3Q96PT4 MIR762-201ENST00000390236 83 ntBASIC20.98■□□□□ 0.95
DUX3Q96PT4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.98■□□□□ 0.95
DUX3Q96PT4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DUX3Q96PT4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DUX3Q96PT4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.96■□□□□ 0.95
DUX3Q96PT4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
DUX3Q96PT4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.95■□□□□ 0.94
DUX3Q96PT4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
DUX3Q96PT4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
DUX3Q96PT4 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.94■□□□□ 0.94
DUX3Q96PT4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DUX3Q96PT4 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DUX3Q96PT4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DUX3Q96PT4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DUX3Q96PT4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.93■□□□□ 0.94
DUX3Q96PT4 DUX4L28-201ENST00000623687 678 ntBASIC20.93■□□□□ 0.94
DUX3Q96PT4 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
DUX3Q96PT4 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DUX3Q96PT4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DUX3Q96PT4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DUX3Q96PT4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DUX3Q96PT4 MIR3665-201ENST00000578708 105 ntBASIC20.92■□□□□ 0.94
DUX3Q96PT4 AC005559.1-201ENST00000589661 871 ntBASIC20.91■□□□□ 0.94
DUX3Q96PT4 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DUX3Q96PT4 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DUX3Q96PT4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DUX3Q96PT4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
DUX3Q96PT4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
DUX3Q96PT4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.88■□□□□ 0.93
DUX3Q96PT4 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DUX3Q96PT4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DUX3Q96PT4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DUX3Q96PT4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DUX3Q96PT4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
DUX3Q96PT4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
DUX3Q96PT4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
DUX3Q96PT4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DUX3Q96PT4 AC087741.3-201ENST00000624270 1347 ntBASIC20.85■□□□□ 0.93
DUX3Q96PT4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DUX3Q96PT4 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC20.84■□□□□ 0.93
DUX3Q96PT4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.84■□□□□ 0.93
DUX3Q96PT4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DUX3Q96PT4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DUX3Q96PT4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.83■□□□□ 0.93
DUX3Q96PT4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
DUX3Q96PT4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
DUX3Q96PT4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DUX3Q96PT4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
DUX3Q96PT4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.81■□□□□ 0.92
DUX3Q96PT4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
DUX3Q96PT4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DUX3Q96PT4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DUX3Q96PT4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.8■□□□□ 0.92
DUX3Q96PT4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DUX3Q96PT4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC20.79■□□□□ 0.92
DUX3Q96PT4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
DUX3Q96PT4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DUX3Q96PT4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
DUX3Q96PT4 AC120057.4-201ENST00000624722 1615 ntBASIC20.78■□□□□ 0.92
DUX3Q96PT4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.77■□□□□ 0.92
DUX3Q96PT4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DUX3Q96PT4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.76■□□□□ 0.91
DUX3Q96PT4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
DUX3Q96PT4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DUX3Q96PT4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
DUX3Q96PT4 AC044849.2-201ENST00000606596 710 ntBASIC20.75■□□□□ 0.91
DUX3Q96PT4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.75■□□□□ 0.91
DUX3Q96PT4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DUX3Q96PT4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.74■□□□□ 0.91
DUX3Q96PT4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.73■□□□□ 0.91
DUX3Q96PT4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DUX3Q96PT4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
DUX3Q96PT4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.72■□□□□ 0.91
DUX3Q96PT4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DUX3Q96PT4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DUX3Q96PT4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DUX3Q96PT4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
DUX3Q96PT4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DUX3Q96PT4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DUX3Q96PT4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DUX3Q96PT4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
DUX3Q96PT4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
DUX3Q96PT4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
DUX3Q96PT4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DUX3Q96PT4 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DUX3Q96PT4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DUX3Q96PT4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms