Protein–RNA interactions for Protein: Q96JP9

CDHR1, Cadherin-related family member 1, humanhuman

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1Q96JP9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CDHR1Q96JP9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.77■■■□□ 2.52
CDHR1Q96JP9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.76■■■□□ 2.51
CDHR1Q96JP9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CDHR1Q96JP9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.76■■■□□ 2.51
CDHR1Q96JP9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CDHR1Q96JP9 MIR762-201ENST00000390236 83 ntBASIC30.75■■■□□ 2.51
CDHR1Q96JP9 MIR3665-201ENST00000578708 105 ntBASIC30.75■■■□□ 2.51
CDHR1Q96JP9 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CDHR1Q96JP9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CDHR1Q96JP9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.73■■■□□ 2.51
CDHR1Q96JP9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CDHR1Q96JP9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CDHR1Q96JP9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CDHR1Q96JP9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CDHR1Q96JP9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.7■■■□□ 2.51
CDHR1Q96JP9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.7■■■□□ 2.51
CDHR1Q96JP9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CDHR1Q96JP9 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
CDHR1Q96JP9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CDHR1Q96JP9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CDHR1Q96JP9 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
CDHR1Q96JP9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.66■■■□□ 2.5
CDHR1Q96JP9 AC005559.1-201ENST00000589661 871 ntBASIC30.65■■■□□ 2.5
CDHR1Q96JP9 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CDHR1Q96JP9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CDHR1Q96JP9 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.63■■■□□ 2.49
CDHR1Q96JP9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CDHR1Q96JP9 DUX4L28-201ENST00000623687 678 ntBASIC30.61■■■□□ 2.49
CDHR1Q96JP9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
CDHR1Q96JP9 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CDHR1Q96JP9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CDHR1Q96JP9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.6■■■□□ 2.49
CDHR1Q96JP9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CDHR1Q96JP9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CDHR1Q96JP9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CDHR1Q96JP9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.56■■■□□ 2.48
CDHR1Q96JP9 AC120057.4-201ENST00000624722 1615 ntBASIC30.56■■■□□ 2.48
CDHR1Q96JP9 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.56■■■□□ 2.48
CDHR1Q96JP9 AC087741.3-201ENST00000624270 1347 ntBASIC30.54■■■□□ 2.48
CDHR1Q96JP9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CDHR1Q96JP9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CDHR1Q96JP9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.52■■■□□ 2.48
CDHR1Q96JP9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
CDHR1Q96JP9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
CDHR1Q96JP9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CDHR1Q96JP9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.51■■■□□ 2.47
CDHR1Q96JP9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.51■■■□□ 2.47
CDHR1Q96JP9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.5■■■□□ 2.47
CDHR1Q96JP9 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
CDHR1Q96JP9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CDHR1Q96JP9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CDHR1Q96JP9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.48■■■□□ 2.47
CDHR1Q96JP9 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CDHR1Q96JP9 AC044849.2-201ENST00000606596 710 ntBASIC30.46■■■□□ 2.47
CDHR1Q96JP9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.45■■■□□ 2.47
CDHR1Q96JP9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CDHR1Q96JP9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CDHR1Q96JP9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CDHR1Q96JP9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.44■■■□□ 2.46
CDHR1Q96JP9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CDHR1Q96JP9 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CDHR1Q96JP9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
CDHR1Q96JP9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.42■■■□□ 2.46
CDHR1Q96JP9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
CDHR1Q96JP9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CDHR1Q96JP9 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CDHR1Q96JP9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
CDHR1Q96JP9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CDHR1Q96JP9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CDHR1Q96JP9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.37■■■□□ 2.45
CDHR1Q96JP9 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CDHR1Q96JP9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDHR1Q96JP9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDHR1Q96JP9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
CDHR1Q96JP9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CDHR1Q96JP9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
CDHR1Q96JP9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CDHR1Q96JP9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.32■■■□□ 2.44
CDHR1Q96JP9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
CDHR1Q96JP9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.32■■■□□ 2.44
CDHR1Q96JP9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CDHR1Q96JP9 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.31■■■□□ 2.44
CDHR1Q96JP9 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CDHR1Q96JP9 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
CDHR1Q96JP9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CDHR1Q96JP9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CDHR1Q96JP9 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
CDHR1Q96JP9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CDHR1Q96JP9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.29■■■□□ 2.44
CDHR1Q96JP9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
CDHR1Q96JP9 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CDHR1Q96JP9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.27■■■□□ 2.44
CDHR1Q96JP9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CDHR1Q96JP9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CDHR1Q96JP9 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CDHR1Q96JP9 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
CDHR1Q96JP9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDHR1Q96JP9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CDHR1Q96JP9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.24■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms