Protein–RNA interactions for Protein: Q969L4

LSM10, U7 snRNA-associated Sm-like protein LSm10, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10Q969L4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
LSM10Q969L4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
LSM10Q969L4 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
LSM10Q969L4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
LSM10Q969L4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LSM10Q969L4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LSM10Q969L4 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LSM10Q969L4 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC22.11■■□□□ 1.13
LSM10Q969L4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
LSM10Q969L4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
LSM10Q969L4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LSM10Q969L4 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LSM10Q969L4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
LSM10Q969L4 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LSM10Q969L4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC22.09■■□□□ 1.13
LSM10Q969L4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LSM10Q969L4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
LSM10Q969L4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LSM10Q969L4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
LSM10Q969L4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LSM10Q969L4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LSM10Q969L4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LSM10Q969L4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LSM10Q969L4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
LSM10Q969L4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
LSM10Q969L4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LSM10Q969L4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.02■■□□□ 1.12
LSM10Q969L4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
LSM10Q969L4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LSM10Q969L4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
LSM10Q969L4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LSM10Q969L4 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC22.01■■□□□ 1.11
LSM10Q969L4 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
LSM10Q969L4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LSM10Q969L4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.99■■□□□ 1.11
LSM10Q969L4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
LSM10Q969L4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LSM10Q969L4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.97■■□□□ 1.11
LSM10Q969L4 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.97■■□□□ 1.11
LSM10Q969L4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC21.96■■□□□ 1.11
LSM10Q969L4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.95■■□□□ 1.11
LSM10Q969L4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
LSM10Q969L4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.95■■□□□ 1.1
LSM10Q969L4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LSM10Q969L4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LSM10Q969L4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LSM10Q969L4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
LSM10Q969L4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
LSM10Q969L4 ST7-AS1-201ENST00000456775 1889 ntBASIC21.93■■□□□ 1.1
LSM10Q969L4 AC139426.1-201ENST00000568218 2529 ntBASIC21.93■■□□□ 1.1
LSM10Q969L4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LSM10Q969L4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.92■■□□□ 1.1
LSM10Q969L4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LSM10Q969L4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.91■■□□□ 1.1
LSM10Q969L4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LSM10Q969L4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LSM10Q969L4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LSM10Q969L4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LSM10Q969L4 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
LSM10Q969L4 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LSM10Q969L4 DYNLL1-208ENST00000550178 581 ntBASIC21.87■■□□□ 1.09
LSM10Q969L4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
LSM10Q969L4 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LSM10Q969L4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LSM10Q969L4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
LSM10Q969L4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LSM10Q969L4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LSM10Q969L4 AL161658.1-201ENST00000623641 1967 ntBASIC21.83■■□□□ 1.08
LSM10Q969L4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
LSM10Q969L4 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LSM10Q969L4 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.82■■□□□ 1.08
LSM10Q969L4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LSM10Q969L4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LSM10Q969L4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LSM10Q969L4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LSM10Q969L4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LSM10Q969L4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
LSM10Q969L4 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LSM10Q969L4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LSM10Q969L4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.79■■□□□ 1.08
LSM10Q969L4 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC21.78■■□□□ 1.08
LSM10Q969L4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LSM10Q969L4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LSM10Q969L4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LSM10Q969L4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LSM10Q969L4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
LSM10Q969L4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LSM10Q969L4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
LSM10Q969L4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
LSM10Q969L4 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
LSM10Q969L4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LSM10Q969L4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LSM10Q969L4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
LSM10Q969L4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LSM10Q969L4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LSM10Q969L4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LSM10Q969L4 AP002365.1-201ENST00000603448 772 ntBASIC21.72■■□□□ 1.07
LSM10Q969L4 AL031258.1-201ENST00000623562 325 ntBASIC21.72■■□□□ 1.07
LSM10Q969L4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LSM10Q969L4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms