Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
TNFRSF25Q93038 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.15■■■□□ 2.58
TNFRSF25Q93038 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.14■■■□□ 2.58
TNFRSF25Q93038 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TNFRSF25Q93038 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.14■■■□□ 2.58
TNFRSF25Q93038 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
TNFRSF25Q93038 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.13■■■□□ 2.57
TNFRSF25Q93038 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
TNFRSF25Q93038 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.11■■■□□ 2.57
TNFRSF25Q93038 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.1■■■□□ 2.57
TNFRSF25Q93038 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
TNFRSF25Q93038 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
TNFRSF25Q93038 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TNFRSF25Q93038 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
TNFRSF25Q93038 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TNFRSF25Q93038 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
TNFRSF25Q93038 AC136428.2-201ENST00000563187 214 ntBASIC31.05■■■□□ 2.56
TNFRSF25Q93038 WASH5P-204ENST00000632292 975 ntBASIC31.04■■■□□ 2.56
TNFRSF25Q93038 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
TNFRSF25Q93038 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
TNFRSF25Q93038 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
TNFRSF25Q93038 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TNFRSF25Q93038 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TNFRSF25Q93038 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
TNFRSF25Q93038 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TNFRSF25Q93038 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31■■■□□ 2.55
TNFRSF25Q93038 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.99■■■□□ 2.55
TNFRSF25Q93038 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.99■■■□□ 2.55
TNFRSF25Q93038 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
TNFRSF25Q93038 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
TNFRSF25Q93038 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.98■■■□□ 2.55
TNFRSF25Q93038 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
TNFRSF25Q93038 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.97■■■□□ 2.55
TNFRSF25Q93038 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
TNFRSF25Q93038 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.96■■■□□ 2.55
TNFRSF25Q93038 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
TNFRSF25Q93038 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.94■■■□□ 2.54
TNFRSF25Q93038 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.94■■■□□ 2.54
TNFRSF25Q93038 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
TNFRSF25Q93038 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.93■■■□□ 2.54
TNFRSF25Q93038 AC097358.2-201ENST00000607541 1159 ntBASIC30.92■■■□□ 2.54
TNFRSF25Q93038 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
TNFRSF25Q93038 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
TNFRSF25Q93038 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
TNFRSF25Q93038 CAHM-201ENST00000604200 896 ntBASIC30.91■■■□□ 2.54
TNFRSF25Q93038 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.9■■■□□ 2.54
TNFRSF25Q93038 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
TNFRSF25Q93038 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.88■■■□□ 2.53
TNFRSF25Q93038 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.88■■■□□ 2.53
TNFRSF25Q93038 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TNFRSF25Q93038 AL161658.1-201ENST00000623641 1967 ntBASIC30.88■■■□□ 2.53
TNFRSF25Q93038 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
TNFRSF25Q93038 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
TNFRSF25Q93038 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
TNFRSF25Q93038 AL391121.1-201ENST00000607967 1349 ntBASIC30.85■■■□□ 2.53
TNFRSF25Q93038 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
TNFRSF25Q93038 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.84■■■□□ 2.53
TNFRSF25Q93038 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.84■■■□□ 2.53
TNFRSF25Q93038 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
TNFRSF25Q93038 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.83■■■□□ 2.53
TNFRSF25Q93038 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
TNFRSF25Q93038 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.81■■■□□ 2.52
TNFRSF25Q93038 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
TNFRSF25Q93038 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
TNFRSF25Q93038 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
TNFRSF25Q93038 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TNFRSF25Q93038 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TNFRSF25Q93038 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
TNFRSF25Q93038 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.77■■■□□ 2.52
TNFRSF25Q93038 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
TNFRSF25Q93038 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.77■■■□□ 2.52
TNFRSF25Q93038 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.77■■■□□ 2.52
TNFRSF25Q93038 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.76■■■□□ 2.51
TNFRSF25Q93038 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
TNFRSF25Q93038 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
TNFRSF25Q93038 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
TNFRSF25Q93038 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
TNFRSF25Q93038 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
TNFRSF25Q93038 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
TNFRSF25Q93038 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
TNFRSF25Q93038 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.72■■■□□ 2.51
TNFRSF25Q93038 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
TNFRSF25Q93038 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
TNFRSF25Q93038 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.69■■■□□ 2.5
TNFRSF25Q93038 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.69■■■□□ 2.5
TNFRSF25Q93038 SUZ12P1-203ENST00000578195 985 ntBASIC30.68■■■□□ 2.5
TNFRSF25Q93038 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TNFRSF25Q93038 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.67■■■□□ 2.5
TNFRSF25Q93038 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TNFRSF25Q93038 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TNFRSF25Q93038 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
TNFRSF25Q93038 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
TNFRSF25Q93038 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.65■■■□□ 2.5
TNFRSF25Q93038 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.65■■■□□ 2.5
TNFRSF25Q93038 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
TNFRSF25Q93038 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TNFRSF25Q93038 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TNFRSF25Q93038 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
TNFRSF25Q93038 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.63■■■□□ 2.49
TNFRSF25Q93038 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms