Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PPP4R1Q8TF05 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.04■■□□□ 1.92
PPP4R1Q8TF05 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
PPP4R1Q8TF05 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
PPP4R1Q8TF05 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.03■■□□□ 1.92
PPP4R1Q8TF05 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.02■■□□□ 1.92
PPP4R1Q8TF05 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PPP4R1Q8TF05 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PPP4R1Q8TF05 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
PPP4R1Q8TF05 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC27■■□□□ 1.91
PPP4R1Q8TF05 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27■■□□□ 1.91
PPP4R1Q8TF05 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PPP4R1Q8TF05 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PPP4R1Q8TF05 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PPP4R1Q8TF05 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PPP4R1Q8TF05 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PPP4R1Q8TF05 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PPP4R1Q8TF05 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
PPP4R1Q8TF05 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.95■■□□□ 1.9
PPP4R1Q8TF05 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PPP4R1Q8TF05 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PPP4R1Q8TF05 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
PPP4R1Q8TF05 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
PPP4R1Q8TF05 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.91■■□□□ 1.9
PPP4R1Q8TF05 ABCB10P3-201ENST00000561950 2166 ntBASIC26.91■■□□□ 1.9
PPP4R1Q8TF05 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.9■■□□□ 1.9
PPP4R1Q8TF05 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PPP4R1Q8TF05 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.9■■□□□ 1.9
PPP4R1Q8TF05 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.89■■□□□ 1.9
PPP4R1Q8TF05 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.88■■□□□ 1.89
PPP4R1Q8TF05 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PPP4R1Q8TF05 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PPP4R1Q8TF05 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PPP4R1Q8TF05 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PPP4R1Q8TF05 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PPP4R1Q8TF05 AL031258.1-201ENST00000623562 325 ntBASIC26.85■■□□□ 1.89
PPP4R1Q8TF05 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.85■■□□□ 1.89
PPP4R1Q8TF05 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PPP4R1Q8TF05 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PPP4R1Q8TF05 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.83■■□□□ 1.89
PPP4R1Q8TF05 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PPP4R1Q8TF05 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.81■■□□□ 1.88
PPP4R1Q8TF05 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
PPP4R1Q8TF05 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.8■■□□□ 1.88
PPP4R1Q8TF05 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.78■■□□□ 1.88
PPP4R1Q8TF05 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PPP4R1Q8TF05 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
PPP4R1Q8TF05 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
PPP4R1Q8TF05 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PPP4R1Q8TF05 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PPP4R1Q8TF05 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PPP4R1Q8TF05 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.75■■□□□ 1.87
PPP4R1Q8TF05 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PPP4R1Q8TF05 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PPP4R1Q8TF05 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
PPP4R1Q8TF05 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.73■■□□□ 1.87
PPP4R1Q8TF05 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.73■■□□□ 1.87
PPP4R1Q8TF05 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
PPP4R1Q8TF05 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
PPP4R1Q8TF05 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
PPP4R1Q8TF05 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PPP4R1Q8TF05 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PPP4R1Q8TF05 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
PPP4R1Q8TF05 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.69■■□□□ 1.86
PPP4R1Q8TF05 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PPP4R1Q8TF05 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PPP4R1Q8TF05 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.68■■□□□ 1.86
PPP4R1Q8TF05 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.68■■□□□ 1.86
PPP4R1Q8TF05 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
PPP4R1Q8TF05 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
PPP4R1Q8TF05 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.66■■□□□ 1.86
PPP4R1Q8TF05 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PPP4R1Q8TF05 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.65■■□□□ 1.86
PPP4R1Q8TF05 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PPP4R1Q8TF05 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
PPP4R1Q8TF05 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PPP4R1Q8TF05 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PPP4R1Q8TF05 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PPP4R1Q8TF05 AC139426.1-201ENST00000568218 2529 ntBASIC26.6■■□□□ 1.85
PPP4R1Q8TF05 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PPP4R1Q8TF05 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PPP4R1Q8TF05 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
PPP4R1Q8TF05 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
PPP4R1Q8TF05 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PPP4R1Q8TF05 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PPP4R1Q8TF05 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
PPP4R1Q8TF05 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PPP4R1Q8TF05 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
PPP4R1Q8TF05 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.56■■□□□ 1.84
PPP4R1Q8TF05 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PPP4R1Q8TF05 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PPP4R1Q8TF05 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PPP4R1Q8TF05 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
PPP4R1Q8TF05 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
PPP4R1Q8TF05 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
PPP4R1Q8TF05 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.54■■□□□ 1.84
PPP4R1Q8TF05 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PPP4R1Q8TF05 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PPP4R1Q8TF05 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.52■■□□□ 1.84
PPP4R1Q8TF05 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms