Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
RDH13Q8NBN7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.7■■■□□ 2.35
RDH13Q8NBN7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
RDH13Q8NBN7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
RDH13Q8NBN7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
RDH13Q8NBN7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.65■■■□□ 2.34
RDH13Q8NBN7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.65■■■□□ 2.34
RDH13Q8NBN7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
RDH13Q8NBN7 AC097358.2-201ENST00000607541 1159 ntBASIC29.64■■■□□ 2.34
RDH13Q8NBN7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RDH13Q8NBN7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
RDH13Q8NBN7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
RDH13Q8NBN7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RDH13Q8NBN7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.62■■■□□ 2.33
RDH13Q8NBN7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RDH13Q8NBN7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
RDH13Q8NBN7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RDH13Q8NBN7 AC136428.2-201ENST00000563187 214 ntBASIC29.61■■■□□ 2.33
RDH13Q8NBN7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RDH13Q8NBN7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.6■■■□□ 2.33
RDH13Q8NBN7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
RDH13Q8NBN7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
RDH13Q8NBN7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.59■■■□□ 2.33
RDH13Q8NBN7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.59■■■□□ 2.33
RDH13Q8NBN7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.58■■■□□ 2.33
RDH13Q8NBN7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
RDH13Q8NBN7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
RDH13Q8NBN7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RDH13Q8NBN7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.55■■■□□ 2.32
RDH13Q8NBN7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.55■■■□□ 2.32
RDH13Q8NBN7 WASH5P-204ENST00000632292 975 ntBASIC29.55■■■□□ 2.32
RDH13Q8NBN7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
RDH13Q8NBN7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RDH13Q8NBN7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.51■■■□□ 2.31
RDH13Q8NBN7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.5■■■□□ 2.31
RDH13Q8NBN7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
RDH13Q8NBN7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.5■■■□□ 2.31
RDH13Q8NBN7 CAHM-201ENST00000604200 896 ntBASIC29.48■■■□□ 2.31
RDH13Q8NBN7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RDH13Q8NBN7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
RDH13Q8NBN7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RDH13Q8NBN7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.45■■■□□ 2.31
RDH13Q8NBN7 AL161658.1-201ENST00000623641 1967 ntBASIC29.43■■■□□ 2.3
RDH13Q8NBN7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.43■■■□□ 2.3
RDH13Q8NBN7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.42■■■□□ 2.3
RDH13Q8NBN7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.42■■■□□ 2.3
RDH13Q8NBN7 AL391121.1-201ENST00000607967 1349 ntBASIC29.42■■■□□ 2.3
RDH13Q8NBN7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RDH13Q8NBN7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RDH13Q8NBN7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RDH13Q8NBN7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
RDH13Q8NBN7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RDH13Q8NBN7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.4■■■□□ 2.3
RDH13Q8NBN7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RDH13Q8NBN7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RDH13Q8NBN7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RDH13Q8NBN7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RDH13Q8NBN7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.38■■■□□ 2.29
RDH13Q8NBN7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RDH13Q8NBN7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RDH13Q8NBN7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.37■■■□□ 2.29
RDH13Q8NBN7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
RDH13Q8NBN7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
RDH13Q8NBN7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
RDH13Q8NBN7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RDH13Q8NBN7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RDH13Q8NBN7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RDH13Q8NBN7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.34■■■□□ 2.29
RDH13Q8NBN7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
RDH13Q8NBN7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RDH13Q8NBN7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
RDH13Q8NBN7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
RDH13Q8NBN7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC29.29■■■□□ 2.28
RDH13Q8NBN7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.29■■■□□ 2.28
RDH13Q8NBN7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
RDH13Q8NBN7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
RDH13Q8NBN7 SUZ12P1-203ENST00000578195 985 ntBASIC29.27■■■□□ 2.28
RDH13Q8NBN7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
RDH13Q8NBN7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.26■■■□□ 2.27
RDH13Q8NBN7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.26■■■□□ 2.27
RDH13Q8NBN7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
RDH13Q8NBN7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
RDH13Q8NBN7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.25■■■□□ 2.27
RDH13Q8NBN7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.24■■■□□ 2.27
RDH13Q8NBN7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RDH13Q8NBN7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RDH13Q8NBN7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.23■■■□□ 2.27
RDH13Q8NBN7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
RDH13Q8NBN7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
RDH13Q8NBN7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.21■■■□□ 2.27
RDH13Q8NBN7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.19■■■□□ 2.26
RDH13Q8NBN7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
RDH13Q8NBN7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
RDH13Q8NBN7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
RDH13Q8NBN7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
RDH13Q8NBN7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
RDH13Q8NBN7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.16■■■□□ 2.26
RDH13Q8NBN7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
RDH13Q8NBN7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
RDH13Q8NBN7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms