Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.16■■□□□ 1.46
CNEP1R1Q8N9A8 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
CNEP1R1Q8N9A8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.14■■□□□ 1.45
CNEP1R1Q8N9A8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CNEP1R1Q8N9A8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CNEP1R1Q8N9A8 MIR762-201ENST00000390236 83 ntBASIC24.13■■□□□ 1.45
CNEP1R1Q8N9A8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.13■■□□□ 1.45
CNEP1R1Q8N9A8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CNEP1R1Q8N9A8 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
CNEP1R1Q8N9A8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CNEP1R1Q8N9A8 MIR3665-201ENST00000578708 105 ntBASIC24.11■■□□□ 1.45
CNEP1R1Q8N9A8 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.11■■□□□ 1.45
CNEP1R1Q8N9A8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.11■■□□□ 1.45
CNEP1R1Q8N9A8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CNEP1R1Q8N9A8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CNEP1R1Q8N9A8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CNEP1R1Q8N9A8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.09■■□□□ 1.45
CNEP1R1Q8N9A8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.09■■□□□ 1.45
CNEP1R1Q8N9A8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CNEP1R1Q8N9A8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CNEP1R1Q8N9A8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CNEP1R1Q8N9A8 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CNEP1R1Q8N9A8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CNEP1R1Q8N9A8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC24.07■■□□□ 1.44
CNEP1R1Q8N9A8 AC005559.1-201ENST00000589661 871 ntBASIC24.07■■□□□ 1.44
CNEP1R1Q8N9A8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.07■■□□□ 1.44
CNEP1R1Q8N9A8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CNEP1R1Q8N9A8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CNEP1R1Q8N9A8 DUX4L28-201ENST00000623687 678 ntBASIC24.03■■□□□ 1.44
CNEP1R1Q8N9A8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CNEP1R1Q8N9A8 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CNEP1R1Q8N9A8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.01■■□□□ 1.43
CNEP1R1Q8N9A8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CNEP1R1Q8N9A8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
CNEP1R1Q8N9A8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CNEP1R1Q8N9A8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CNEP1R1Q8N9A8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CNEP1R1Q8N9A8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.98■■□□□ 1.43
CNEP1R1Q8N9A8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CNEP1R1Q8N9A8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CNEP1R1Q8N9A8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
CNEP1R1Q8N9A8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.97■■□□□ 1.43
CNEP1R1Q8N9A8 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC23.97■■□□□ 1.43
CNEP1R1Q8N9A8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CNEP1R1Q8N9A8 AC087741.3-201ENST00000624270 1347 ntBASIC23.95■■□□□ 1.42
CNEP1R1Q8N9A8 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CNEP1R1Q8N9A8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.95■■□□□ 1.42
CNEP1R1Q8N9A8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CNEP1R1Q8N9A8 AC120057.4-201ENST00000624722 1615 ntBASIC23.93■■□□□ 1.42
CNEP1R1Q8N9A8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CNEP1R1Q8N9A8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CNEP1R1Q8N9A8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.92■■□□□ 1.42
CNEP1R1Q8N9A8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CNEP1R1Q8N9A8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.9■■□□□ 1.42
CNEP1R1Q8N9A8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.9■■□□□ 1.42
CNEP1R1Q8N9A8 AC044849.2-201ENST00000606596 710 ntBASIC23.9■■□□□ 1.42
CNEP1R1Q8N9A8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CNEP1R1Q8N9A8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CNEP1R1Q8N9A8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.88■■□□□ 1.41
CNEP1R1Q8N9A8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CNEP1R1Q8N9A8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
CNEP1R1Q8N9A8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.88■■□□□ 1.41
CNEP1R1Q8N9A8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CNEP1R1Q8N9A8 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
CNEP1R1Q8N9A8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.87■■□□□ 1.41
CNEP1R1Q8N9A8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
CNEP1R1Q8N9A8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
CNEP1R1Q8N9A8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.85■■□□□ 1.41
CNEP1R1Q8N9A8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
CNEP1R1Q8N9A8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CNEP1R1Q8N9A8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
CNEP1R1Q8N9A8 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CNEP1R1Q8N9A8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CNEP1R1Q8N9A8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CNEP1R1Q8N9A8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CNEP1R1Q8N9A8 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CNEP1R1Q8N9A8 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CNEP1R1Q8N9A8 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CNEP1R1Q8N9A8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CNEP1R1Q8N9A8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CNEP1R1Q8N9A8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CNEP1R1Q8N9A8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CNEP1R1Q8N9A8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.79■■□□□ 1.4
CNEP1R1Q8N9A8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CNEP1R1Q8N9A8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.79■■□□□ 1.4
CNEP1R1Q8N9A8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.79■■□□□ 1.4
CNEP1R1Q8N9A8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CNEP1R1Q8N9A8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CNEP1R1Q8N9A8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CNEP1R1Q8N9A8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.77■■□□□ 1.4
CNEP1R1Q8N9A8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CNEP1R1Q8N9A8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CNEP1R1Q8N9A8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CNEP1R1Q8N9A8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.76■■□□□ 1.39
CNEP1R1Q8N9A8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CNEP1R1Q8N9A8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CNEP1R1Q8N9A8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CNEP1R1Q8N9A8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CNEP1R1Q8N9A8 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CNEP1R1Q8N9A8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 299.4 ms