Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
C3orf56Q8N813 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
C3orf56Q8N813 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.62■■□□□ 1.05
C3orf56Q8N813 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
C3orf56Q8N813 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
C3orf56Q8N813 MIR639-201ENST00000384974 98 ntBASIC21.59■■□□□ 1.05
C3orf56Q8N813 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
C3orf56Q8N813 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.58■■□□□ 1.05
C3orf56Q8N813 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
C3orf56Q8N813 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
C3orf56Q8N813 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
C3orf56Q8N813 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
C3orf56Q8N813 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.54■■□□□ 1.04
C3orf56Q8N813 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
C3orf56Q8N813 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.53■■□□□ 1.04
C3orf56Q8N813 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.52■■□□□ 1.04
C3orf56Q8N813 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.51■■□□□ 1.03
C3orf56Q8N813 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
C3orf56Q8N813 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
C3orf56Q8N813 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
C3orf56Q8N813 HSD17B1P1-201ENST00000590052 955 ntBASIC21.49■■□□□ 1.03
C3orf56Q8N813 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
C3orf56Q8N813 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC21.49■■□□□ 1.03
C3orf56Q8N813 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
C3orf56Q8N813 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
C3orf56Q8N813 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.47■■□□□ 1.03
C3orf56Q8N813 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.46■■□□□ 1.03
C3orf56Q8N813 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
C3orf56Q8N813 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.46■■□□□ 1.03
C3orf56Q8N813 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.46■■□□□ 1.03
C3orf56Q8N813 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.46■■□□□ 1.03
C3orf56Q8N813 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
C3orf56Q8N813 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
C3orf56Q8N813 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
C3orf56Q8N813 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.44■■□□□ 1.02
C3orf56Q8N813 AC021231.2-201ENST00000594613 730 ntBASIC21.44■■□□□ 1.02
C3orf56Q8N813 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.44■■□□□ 1.02
C3orf56Q8N813 AC016575.1-201ENST00000607026 382 ntBASIC21.43■■□□□ 1.02
C3orf56Q8N813 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
C3orf56Q8N813 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
C3orf56Q8N813 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
C3orf56Q8N813 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.42■■□□□ 1.02
C3orf56Q8N813 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
C3orf56Q8N813 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.41■■□□□ 1.02
C3orf56Q8N813 MIR3648-2-201ENST00000581792 180 ntBASIC21.41■■□□□ 1.02
C3orf56Q8N813 MIR3648-1-201ENST00000615959 180 ntBASIC21.41■■□□□ 1.02
C3orf56Q8N813 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
C3orf56Q8N813 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.4■■□□□ 1.02
C3orf56Q8N813 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.4■■□□□ 1.02
C3orf56Q8N813 WASH5P-204ENST00000632292 975 ntBASIC21.39■■□□□ 1.01
C3orf56Q8N813 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
C3orf56Q8N813 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.38■■□□□ 1.01
C3orf56Q8N813 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
C3orf56Q8N813 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.37■■□□□ 1.01
C3orf56Q8N813 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
C3orf56Q8N813 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
C3orf56Q8N813 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
C3orf56Q8N813 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
C3orf56Q8N813 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.36■■□□□ 1.01
C3orf56Q8N813 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.36■■□□□ 1.01
C3orf56Q8N813 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
C3orf56Q8N813 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
C3orf56Q8N813 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
C3orf56Q8N813 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.34■■□□□ 1.01
C3orf56Q8N813 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.34■■□□□ 1.01
C3orf56Q8N813 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
C3orf56Q8N813 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
C3orf56Q8N813 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C3orf56Q8N813 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
C3orf56Q8N813 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C3orf56Q8N813 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.31■■□□□ 1
C3orf56Q8N813 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.3■■□□□ 1
C3orf56Q8N813 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.3■■□□□ 1
C3orf56Q8N813 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.29■■□□□ 1
C3orf56Q8N813 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
C3orf56Q8N813 AC108673.1-201ENST00000510422 1159 ntBASIC21.28■■□□□ 1
C3orf56Q8N813 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.28■■□□□ 1
C3orf56Q8N813 DUX4L11-201ENST00000611504 1267 ntBASIC21.28■■□□□ 1
C3orf56Q8N813 DUX4L12-201ENST00000614593 1267 ntBASIC21.28■■□□□ 1
C3orf56Q8N813 DUX4L14-201ENST00000621227 1267 ntBASIC21.28■■□□□ 1
C3orf56Q8N813 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
C3orf56Q8N813 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
C3orf56Q8N813 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
C3orf56Q8N813 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
C3orf56Q8N813 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
C3orf56Q8N813 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
C3orf56Q8N813 LINC01971-201ENST00000617888 1048 ntBASIC21.25■□□□□ 0.99
C3orf56Q8N813 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
C3orf56Q8N813 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
C3orf56Q8N813 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.23■□□□□ 0.99
C3orf56Q8N813 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
C3orf56Q8N813 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.23■□□□□ 0.99
C3orf56Q8N813 CR559946.2-201ENST00000623684 991 ntBASIC21.23■□□□□ 0.99
C3orf56Q8N813 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
C3orf56Q8N813 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
C3orf56Q8N813 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.22■□□□□ 0.99
C3orf56Q8N813 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.22■□□□□ 0.99
C3orf56Q8N813 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.2■□□□□ 0.98
C3orf56Q8N813 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC21.2■□□□□ 0.98
C3orf56Q8N813 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms