Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TTC9CQ8N5M4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TTC9CQ8N5M4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TTC9CQ8N5M4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TTC9CQ8N5M4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TTC9CQ8N5M4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.36■■□□□ 1.01
TTC9CQ8N5M4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TTC9CQ8N5M4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TTC9CQ8N5M4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TTC9CQ8N5M4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TTC9CQ8N5M4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TTC9CQ8N5M4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.33■■□□□ 1.01
TTC9CQ8N5M4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.32■■□□□ 1
TTC9CQ8N5M4 AL133380.1-201ENST00000506013 324 ntBASIC21.32■■□□□ 1
TTC9CQ8N5M4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.32■■□□□ 1
TTC9CQ8N5M4 RARRES2P7-201ENST00000567349 469 ntBASIC21.32■■□□□ 1
TTC9CQ8N5M4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TTC9CQ8N5M4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TTC9CQ8N5M4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TTC9CQ8N5M4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TTC9CQ8N5M4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.28■■□□□ 1
TTC9CQ8N5M4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
TTC9CQ8N5M4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.27■■□□□ 1
TTC9CQ8N5M4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.27■■□□□ 1
TTC9CQ8N5M4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
TTC9CQ8N5M4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TTC9CQ8N5M4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
TTC9CQ8N5M4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TTC9CQ8N5M4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TTC9CQ8N5M4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.25■□□□□ 0.99
TTC9CQ8N5M4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TTC9CQ8N5M4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TTC9CQ8N5M4 WASH5P-204ENST00000632292 975 ntBASIC21.24■□□□□ 0.99
TTC9CQ8N5M4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TTC9CQ8N5M4 SETD8P1-201ENST00000623146 1180 ntBASIC21.23■□□□□ 0.99
TTC9CQ8N5M4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TTC9CQ8N5M4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TTC9CQ8N5M4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TTC9CQ8N5M4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC9CQ8N5M4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.21■□□□□ 0.99
TTC9CQ8N5M4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
TTC9CQ8N5M4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TTC9CQ8N5M4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TTC9CQ8N5M4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TTC9CQ8N5M4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
TTC9CQ8N5M4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TTC9CQ8N5M4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TTC9CQ8N5M4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
TTC9CQ8N5M4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TTC9CQ8N5M4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TTC9CQ8N5M4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TTC9CQ8N5M4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.17■□□□□ 0.98
TTC9CQ8N5M4 AL161658.1-201ENST00000623641 1967 ntBASIC21.17■□□□□ 0.98
TTC9CQ8N5M4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TTC9CQ8N5M4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC9CQ8N5M4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC9CQ8N5M4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TTC9CQ8N5M4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC9CQ8N5M4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC9CQ8N5M4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TTC9CQ8N5M4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TTC9CQ8N5M4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.11■□□□□ 0.97
TTC9CQ8N5M4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TTC9CQ8N5M4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TTC9CQ8N5M4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC9CQ8N5M4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC9CQ8N5M4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC9CQ8N5M4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC9CQ8N5M4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.08■□□□□ 0.97
TTC9CQ8N5M4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.06■□□□□ 0.96
TTC9CQ8N5M4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TTC9CQ8N5M4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC9CQ8N5M4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TTC9CQ8N5M4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC9CQ8N5M4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TTC9CQ8N5M4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TTC9CQ8N5M4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TTC9CQ8N5M4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TTC9CQ8N5M4 AC097358.2-201ENST00000607541 1159 ntBASIC21.05■□□□□ 0.96
TTC9CQ8N5M4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC9CQ8N5M4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TTC9CQ8N5M4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TTC9CQ8N5M4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TTC9CQ8N5M4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TTC9CQ8N5M4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TTC9CQ8N5M4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TTC9CQ8N5M4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TTC9CQ8N5M4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.03■□□□□ 0.96
TTC9CQ8N5M4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.03■□□□□ 0.96
TTC9CQ8N5M4 AC136428.2-201ENST00000563187 214 ntBASIC21.03■□□□□ 0.96
TTC9CQ8N5M4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TTC9CQ8N5M4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TTC9CQ8N5M4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.02■□□□□ 0.96
TTC9CQ8N5M4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC9CQ8N5M4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TTC9CQ8N5M4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
TTC9CQ8N5M4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21■□□□□ 0.95
TTC9CQ8N5M4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TTC9CQ8N5M4 AL391121.1-201ENST00000607967 1349 ntBASIC21■□□□□ 0.95
TTC9CQ8N5M4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms