Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
LINC01561Q8N1V8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01561Q8N1V8 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01561Q8N1V8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01561Q8N1V8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01561Q8N1V8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC01561Q8N1V8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01561Q8N1V8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01561Q8N1V8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01561Q8N1V8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
LINC01561Q8N1V8 ABCB10P3-201ENST00000561950 2166 ntBASIC18.17■□□□□ 0.5
LINC01561Q8N1V8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01561Q8N1V8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LINC01561Q8N1V8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01561Q8N1V8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01561Q8N1V8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01561Q8N1V8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01561Q8N1V8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LINC01561Q8N1V8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01561Q8N1V8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01561Q8N1V8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.14■□□□□ 0.49
LINC01561Q8N1V8 ZNRF2P1-201ENST00000441407 443 ntBASIC18.14■□□□□ 0.49
LINC01561Q8N1V8 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01561Q8N1V8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01561Q8N1V8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC01561Q8N1V8 AC139426.1-201ENST00000568218 2529 ntBASIC18.13■□□□□ 0.49
LINC01561Q8N1V8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC01561Q8N1V8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01561Q8N1V8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC18.12■□□□□ 0.49
LINC01561Q8N1V8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01561Q8N1V8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01561Q8N1V8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01561Q8N1V8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC01561Q8N1V8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01561Q8N1V8 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC18.09■□□□□ 0.49
LINC01561Q8N1V8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LINC01561Q8N1V8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01561Q8N1V8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LINC01561Q8N1V8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01561Q8N1V8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LINC01561Q8N1V8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01561Q8N1V8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01561Q8N1V8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01561Q8N1V8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01561Q8N1V8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01561Q8N1V8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01561Q8N1V8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01561Q8N1V8 ST7-AS1-201ENST00000456775 1889 ntBASIC18.04■□□□□ 0.48
LINC01561Q8N1V8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01561Q8N1V8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01561Q8N1V8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LINC01561Q8N1V8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01561Q8N1V8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
LINC01561Q8N1V8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINC01561Q8N1V8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
LINC01561Q8N1V8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.02■□□□□ 0.47
LINC01561Q8N1V8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LINC01561Q8N1V8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01561Q8N1V8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01561Q8N1V8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC01561Q8N1V8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC01561Q8N1V8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01561Q8N1V8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01561Q8N1V8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01561Q8N1V8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01561Q8N1V8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01561Q8N1V8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01561Q8N1V8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
LINC01561Q8N1V8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01561Q8N1V8 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01561Q8N1V8 DYNLL1-208ENST00000550178 581 ntBASIC17.97■□□□□ 0.47
LINC01561Q8N1V8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01561Q8N1V8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
LINC01561Q8N1V8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01561Q8N1V8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
LINC01561Q8N1V8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01561Q8N1V8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
LINC01561Q8N1V8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01561Q8N1V8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC17.95■□□□□ 0.46
LINC01561Q8N1V8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01561Q8N1V8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LINC01561Q8N1V8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01561Q8N1V8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01561Q8N1V8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LINC01561Q8N1V8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LINC01561Q8N1V8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LINC01561Q8N1V8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC17.92■□□□□ 0.46
LINC01561Q8N1V8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01561Q8N1V8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
LINC01561Q8N1V8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01561Q8N1V8 AL135925.1-201ENST00000605920 1701 ntBASIC17.91■□□□□ 0.46
LINC01561Q8N1V8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01561Q8N1V8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01561Q8N1V8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC17.9■□□□□ 0.46
LINC01561Q8N1V8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01561Q8N1V8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01561Q8N1V8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01561Q8N1V8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01561Q8N1V8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01561Q8N1V8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms