Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.76■■■□□ 2.2
DENND4AQ7Z401 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
DENND4AQ7Z401 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
DENND4AQ7Z401 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
DENND4AQ7Z401 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
DENND4AQ7Z401 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
DENND4AQ7Z401 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.72■■■□□ 2.19
DENND4AQ7Z401 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
DENND4AQ7Z401 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
DENND4AQ7Z401 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
DENND4AQ7Z401 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.69■■■□□ 2.18
DENND4AQ7Z401 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
DENND4AQ7Z401 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
DENND4AQ7Z401 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.68■■■□□ 2.18
DENND4AQ7Z401 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
DENND4AQ7Z401 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.67■■■□□ 2.18
DENND4AQ7Z401 WASH5P-204ENST00000632292 975 ntBASIC28.67■■■□□ 2.18
DENND4AQ7Z401 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
DENND4AQ7Z401 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.66■■■□□ 2.18
DENND4AQ7Z401 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.65■■■□□ 2.18
DENND4AQ7Z401 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
DENND4AQ7Z401 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.61■■■□□ 2.17
DENND4AQ7Z401 ZNRF2P2-203ENST00000454624 420 ntBASIC28.61■■■□□ 2.17
DENND4AQ7Z401 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.61■■■□□ 2.17
DENND4AQ7Z401 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.6■■■□□ 2.17
DENND4AQ7Z401 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
DENND4AQ7Z401 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
DENND4AQ7Z401 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
DENND4AQ7Z401 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.58■■■□□ 2.17
DENND4AQ7Z401 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC28.58■■■□□ 2.17
DENND4AQ7Z401 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.57■■■□□ 2.16
DENND4AQ7Z401 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC28.56■■■□□ 2.16
DENND4AQ7Z401 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
DENND4AQ7Z401 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
DENND4AQ7Z401 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
DENND4AQ7Z401 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
DENND4AQ7Z401 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.52■■■□□ 2.16
DENND4AQ7Z401 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
DENND4AQ7Z401 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
DENND4AQ7Z401 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
DENND4AQ7Z401 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
DENND4AQ7Z401 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
DENND4AQ7Z401 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
DENND4AQ7Z401 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
DENND4AQ7Z401 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
DENND4AQ7Z401 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.48■■■□□ 2.15
DENND4AQ7Z401 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
DENND4AQ7Z401 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
DENND4AQ7Z401 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.46■■■□□ 2.15
DENND4AQ7Z401 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
DENND4AQ7Z401 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.46■■■□□ 2.15
DENND4AQ7Z401 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
DENND4AQ7Z401 MIR4449-201ENST00000578365 66 ntBASIC28.42■■■□□ 2.14
DENND4AQ7Z401 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
DENND4AQ7Z401 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
DENND4AQ7Z401 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
DENND4AQ7Z401 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
DENND4AQ7Z401 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.4■■■□□ 2.14
DENND4AQ7Z401 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
DENND4AQ7Z401 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.39■■■□□ 2.14
DENND4AQ7Z401 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
DENND4AQ7Z401 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
DENND4AQ7Z401 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
DENND4AQ7Z401 DUX4L29-201ENST00000425409 679 ntBASIC28.38■■■□□ 2.13
DENND4AQ7Z401 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.38■■■□□ 2.13
DENND4AQ7Z401 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
DENND4AQ7Z401 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
DENND4AQ7Z401 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.35■■■□□ 2.13
DENND4AQ7Z401 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
DENND4AQ7Z401 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
DENND4AQ7Z401 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
DENND4AQ7Z401 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
DENND4AQ7Z401 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
DENND4AQ7Z401 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
DENND4AQ7Z401 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.29■■■□□ 2.12
DENND4AQ7Z401 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
DENND4AQ7Z401 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
DENND4AQ7Z401 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
DENND4AQ7Z401 AC021231.2-201ENST00000594613 730 ntBASIC28.27■■■□□ 2.12
DENND4AQ7Z401 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
DENND4AQ7Z401 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.27■■■□□ 2.12
DENND4AQ7Z401 MIR639-201ENST00000384974 98 ntBASIC28.26■■■□□ 2.11
DENND4AQ7Z401 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.26■■■□□ 2.11
DENND4AQ7Z401 CR559946.2-201ENST00000623684 991 ntBASIC28.25■■■□□ 2.11
DENND4AQ7Z401 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
DENND4AQ7Z401 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
DENND4AQ7Z401 AC016575.1-201ENST00000607026 382 ntBASIC28.24■■■□□ 2.11
DENND4AQ7Z401 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.23■■■□□ 2.11
DENND4AQ7Z401 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
DENND4AQ7Z401 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.22■■■□□ 2.11
DENND4AQ7Z401 MIR3648-2-201ENST00000581792 180 ntBASIC28.22■■■□□ 2.11
DENND4AQ7Z401 MIR3648-1-201ENST00000615959 180 ntBASIC28.22■■■□□ 2.11
DENND4AQ7Z401 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
DENND4AQ7Z401 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.21■■■□□ 2.11
DENND4AQ7Z401 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.21■■■□□ 2.11
DENND4AQ7Z401 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.2■■■□□ 2.1
DENND4AQ7Z401 AC108673.1-201ENST00000510422 1159 ntBASIC28.19■■■□□ 2.1
DENND4AQ7Z401 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
DENND4AQ7Z401 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
DENND4AQ7Z401 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms