Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 WASH5P-204ENST00000632292 975 ntBASIC30.05■■■□□ 2.4
CNKSR3Q6P9H4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.04■■■□□ 2.4
CNKSR3Q6P9H4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CNKSR3Q6P9H4 ZNRF2P2-203ENST00000454624 420 ntBASIC30.03■■■□□ 2.4
CNKSR3Q6P9H4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.02■■■□□ 2.4
CNKSR3Q6P9H4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CNKSR3Q6P9H4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CNKSR3Q6P9H4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC29.98■■■□□ 2.39
CNKSR3Q6P9H4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.96■■■□□ 2.39
CNKSR3Q6P9H4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.38
CNKSR3Q6P9H4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CNKSR3Q6P9H4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CNKSR3Q6P9H4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CNKSR3Q6P9H4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC29.92■■■□□ 2.38
CNKSR3Q6P9H4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.92■■■□□ 2.38
CNKSR3Q6P9H4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
CNKSR3Q6P9H4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CNKSR3Q6P9H4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CNKSR3Q6P9H4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
CNKSR3Q6P9H4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CNKSR3Q6P9H4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.9■■■□□ 2.38
CNKSR3Q6P9H4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.88■■■□□ 2.37
CNKSR3Q6P9H4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CNKSR3Q6P9H4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CNKSR3Q6P9H4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.86■■■□□ 2.37
CNKSR3Q6P9H4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CNKSR3Q6P9H4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.84■■■□□ 2.37
CNKSR3Q6P9H4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CNKSR3Q6P9H4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.84■■■□□ 2.37
CNKSR3Q6P9H4 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
CNKSR3Q6P9H4 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CNKSR3Q6P9H4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CNKSR3Q6P9H4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CNKSR3Q6P9H4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.81■■■□□ 2.36
CNKSR3Q6P9H4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CNKSR3Q6P9H4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
CNKSR3Q6P9H4 DUX4L29-201ENST00000425409 679 ntBASIC29.8■■■□□ 2.36
CNKSR3Q6P9H4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
CNKSR3Q6P9H4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CNKSR3Q6P9H4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.78■■■□□ 2.36
CNKSR3Q6P9H4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CNKSR3Q6P9H4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CNKSR3Q6P9H4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CNKSR3Q6P9H4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.75■■■□□ 2.35
CNKSR3Q6P9H4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CNKSR3Q6P9H4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CNKSR3Q6P9H4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CNKSR3Q6P9H4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
CNKSR3Q6P9H4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
CNKSR3Q6P9H4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
CNKSR3Q6P9H4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CNKSR3Q6P9H4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CNKSR3Q6P9H4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CNKSR3Q6P9H4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CNKSR3Q6P9H4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.7■■■□□ 2.34
CNKSR3Q6P9H4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
CNKSR3Q6P9H4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CNKSR3Q6P9H4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
CNKSR3Q6P9H4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.66■■■□□ 2.34
CNKSR3Q6P9H4 AC021231.2-201ENST00000594613 730 ntBASIC29.66■■■□□ 2.34
CNKSR3Q6P9H4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
CNKSR3Q6P9H4 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.65■■■□□ 2.34
CNKSR3Q6P9H4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CNKSR3Q6P9H4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CNKSR3Q6P9H4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.63■■■□□ 2.33
CNKSR3Q6P9H4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.63■■■□□ 2.33
CNKSR3Q6P9H4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CNKSR3Q6P9H4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CNKSR3Q6P9H4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
CNKSR3Q6P9H4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.61■■■□□ 2.33
CNKSR3Q6P9H4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.61■■■□□ 2.33
CNKSR3Q6P9H4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.6■■■□□ 2.33
CNKSR3Q6P9H4 MIR4449-201ENST00000578365 66 ntBASIC29.6■■■□□ 2.33
CNKSR3Q6P9H4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.6■■■□□ 2.33
CNKSR3Q6P9H4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CNKSR3Q6P9H4 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CNKSR3Q6P9H4 MIR639-201ENST00000384974 98 ntBASIC29.57■■■□□ 2.32
CNKSR3Q6P9H4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CNKSR3Q6P9H4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.55■■■□□ 2.32
CNKSR3Q6P9H4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CNKSR3Q6P9H4 AC108673.1-201ENST00000510422 1159 ntBASIC29.54■■■□□ 2.32
CNKSR3Q6P9H4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.54■■■□□ 2.32
CNKSR3Q6P9H4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.53■■■□□ 2.32
CNKSR3Q6P9H4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CNKSR3Q6P9H4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CNKSR3Q6P9H4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.51■■■□□ 2.31
CNKSR3Q6P9H4 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CNKSR3Q6P9H4 MIR6090-201ENST00000622481 60 ntBASIC29.49■■■□□ 2.31
CNKSR3Q6P9H4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CNKSR3Q6P9H4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.48■■■□□ 2.31
CNKSR3Q6P9H4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.48■■■□□ 2.31
CNKSR3Q6P9H4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
CNKSR3Q6P9H4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.47■■■□□ 2.31
CNKSR3Q6P9H4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CNKSR3Q6P9H4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
CNKSR3Q6P9H4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CNKSR3Q6P9H4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.45■■■□□ 2.31
CNKSR3Q6P9H4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.31
CNKSR3Q6P9H4 MIR3648-2-201ENST00000581792 180 ntBASIC29.45■■■□□ 2.31
CNKSR3Q6P9H4 MIR3648-1-201ENST00000615959 180 ntBASIC29.45■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms