Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF20Q53R12 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF20Q53R12 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TM4SF20Q53R12 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF20Q53R12 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF20Q53R12 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.89■□□□□ 0.94
TM4SF20Q53R12 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF20Q53R12 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF20Q53R12 SETD8P1-201ENST00000623146 1180 ntBASIC20.89■□□□□ 0.93
TM4SF20Q53R12 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF20Q53R12 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF20Q53R12 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TM4SF20Q53R12 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.87■□□□□ 0.93
TM4SF20Q53R12 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TM4SF20Q53R12 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TM4SF20Q53R12 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TM4SF20Q53R12 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF20Q53R12 AL133380.1-201ENST00000506013 324 ntBASIC20.85■□□□□ 0.93
TM4SF20Q53R12 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.85■□□□□ 0.93
TM4SF20Q53R12 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TM4SF20Q53R12 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TM4SF20Q53R12 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TM4SF20Q53R12 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.84■□□□□ 0.93
TM4SF20Q53R12 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TM4SF20Q53R12 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
TM4SF20Q53R12 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM4SF20Q53R12 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM4SF20Q53R12 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TM4SF20Q53R12 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TM4SF20Q53R12 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TM4SF20Q53R12 AC097358.2-201ENST00000607541 1159 ntBASIC20.76■□□□□ 0.91
TM4SF20Q53R12 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF20Q53R12 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF20Q53R12 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.75■□□□□ 0.91
TM4SF20Q53R12 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF20Q53R12 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.75■□□□□ 0.91
TM4SF20Q53R12 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TM4SF20Q53R12 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.74■□□□□ 0.91
TM4SF20Q53R12 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TM4SF20Q53R12 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TM4SF20Q53R12 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TM4SF20Q53R12 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TM4SF20Q53R12 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TM4SF20Q53R12 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF20Q53R12 AC136428.2-201ENST00000563187 214 ntBASIC20.72■□□□□ 0.91
TM4SF20Q53R12 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF20Q53R12 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM4SF20Q53R12 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.71■□□□□ 0.91
TM4SF20Q53R12 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TM4SF20Q53R12 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
TM4SF20Q53R12 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF20Q53R12 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF20Q53R12 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF20Q53R12 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.7■□□□□ 0.9
TM4SF20Q53R12 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF20Q53R12 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF20Q53R12 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.69■□□□□ 0.9
TM4SF20Q53R12 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF20Q53R12 WASH5P-204ENST00000632292 975 ntBASIC20.68■□□□□ 0.9
TM4SF20Q53R12 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF20Q53R12 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TM4SF20Q53R12 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.64■□□□□ 0.89
TM4SF20Q53R12 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM4SF20Q53R12 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
TM4SF20Q53R12 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
TM4SF20Q53R12 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF20Q53R12 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF20Q53R12 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF20Q53R12 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF20Q53R12 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF20Q53R12 CAHM-201ENST00000604200 896 ntBASIC20.61■□□□□ 0.89
TM4SF20Q53R12 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF20Q53R12 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.6■□□□□ 0.89
TM4SF20Q53R12 AL391121.1-201ENST00000607967 1349 ntBASIC20.59■□□□□ 0.89
TM4SF20Q53R12 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TM4SF20Q53R12 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.59■□□□□ 0.89
TM4SF20Q53R12 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.58■□□□□ 0.89
TM4SF20Q53R12 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TM4SF20Q53R12 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF20Q53R12 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.57■□□□□ 0.88
TM4SF20Q53R12 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.57■□□□□ 0.88
TM4SF20Q53R12 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF20Q53R12 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TM4SF20Q53R12 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF20Q53R12 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF20Q53R12 AL161658.1-201ENST00000623641 1967 ntBASIC20.55■□□□□ 0.88
TM4SF20Q53R12 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF20Q53R12 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.55■□□□□ 0.88
TM4SF20Q53R12 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.55■□□□□ 0.88
TM4SF20Q53R12 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF20Q53R12 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
TM4SF20Q53R12 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TM4SF20Q53R12 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM4SF20Q53R12 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TM4SF20Q53R12 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TM4SF20Q53R12 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM4SF20Q53R12 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.52■□□□□ 0.88
TM4SF20Q53R12 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TM4SF20Q53R12 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TM4SF20Q53R12 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms