Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.52■■□□□ 1.36
CHRFAM7AQ494W8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.51■■□□□ 1.35
CHRFAM7AQ494W8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.51■■□□□ 1.35
CHRFAM7AQ494W8 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHRFAM7AQ494W8 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC23.49■■□□□ 1.35
CHRFAM7AQ494W8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHRFAM7AQ494W8 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHRFAM7AQ494W8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHRFAM7AQ494W8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
CHRFAM7AQ494W8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHRFAM7AQ494W8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHRFAM7AQ494W8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
CHRFAM7AQ494W8 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHRFAM7AQ494W8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHRFAM7AQ494W8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHRFAM7AQ494W8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHRFAM7AQ494W8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.44■■□□□ 1.34
CHRFAM7AQ494W8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CHRFAM7AQ494W8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CHRFAM7AQ494W8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CHRFAM7AQ494W8 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC23.43■■□□□ 1.34
CHRFAM7AQ494W8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CHRFAM7AQ494W8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.41■■□□□ 1.34
CHRFAM7AQ494W8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CHRFAM7AQ494W8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.39■■□□□ 1.33
CHRFAM7AQ494W8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHRFAM7AQ494W8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.36■■□□□ 1.33
CHRFAM7AQ494W8 AP006261.1-201ENST00000584783 668 ntBASIC23.36■■□□□ 1.33
CHRFAM7AQ494W8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHRFAM7AQ494W8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHRFAM7AQ494W8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHRFAM7AQ494W8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHRFAM7AQ494W8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHRFAM7AQ494W8 AL162393.1-201ENST00000437852 946 ntBASIC23.34■■□□□ 1.33
CHRFAM7AQ494W8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.33■■□□□ 1.32
CHRFAM7AQ494W8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CHRFAM7AQ494W8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.32■■□□□ 1.32
CHRFAM7AQ494W8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHRFAM7AQ494W8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHRFAM7AQ494W8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHRFAM7AQ494W8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.28■■□□□ 1.32
CHRFAM7AQ494W8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.27■■□□□ 1.32
CHRFAM7AQ494W8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC23.26■■□□□ 1.31
CHRFAM7AQ494W8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHRFAM7AQ494W8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHRFAM7AQ494W8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.25■■□□□ 1.31
CHRFAM7AQ494W8 CAHM-201ENST00000604200 896 ntBASIC23.25■■□□□ 1.31
CHRFAM7AQ494W8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.23■■□□□ 1.31
CHRFAM7AQ494W8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CHRFAM7AQ494W8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CHRFAM7AQ494W8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.22■■□□□ 1.31
CHRFAM7AQ494W8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CHRFAM7AQ494W8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHRFAM7AQ494W8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHRFAM7AQ494W8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.21■■□□□ 1.31
CHRFAM7AQ494W8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
CHRFAM7AQ494W8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHRFAM7AQ494W8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.2■■□□□ 1.3
CHRFAM7AQ494W8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHRFAM7AQ494W8 MVK-208ENST00000539696 608 ntTSL 5 BASIC23.19■■□□□ 1.3
CHRFAM7AQ494W8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CHRFAM7AQ494W8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHRFAM7AQ494W8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHRFAM7AQ494W8 AC120057.4-201ENST00000624722 1615 ntBASIC23.18■■□□□ 1.3
CHRFAM7AQ494W8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHRFAM7AQ494W8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CHRFAM7AQ494W8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHRFAM7AQ494W8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHRFAM7AQ494W8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CHRFAM7AQ494W8 MIR7108-201ENST00000614319 87 ntBASIC23.17■■□□□ 1.3
CHRFAM7AQ494W8 AL391121.1-201ENST00000607967 1349 ntBASIC23.16■■□□□ 1.3
CHRFAM7AQ494W8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHRFAM7AQ494W8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CHRFAM7AQ494W8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHRFAM7AQ494W8 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.14■■□□□ 1.3
CHRFAM7AQ494W8 ABCB10P1-201ENST00000614297 2181 ntBASIC23.14■■□□□ 1.3
CHRFAM7AQ494W8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CHRFAM7AQ494W8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
CHRFAM7AQ494W8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHRFAM7AQ494W8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHRFAM7AQ494W8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHRFAM7AQ494W8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.13■■□□□ 1.29
CHRFAM7AQ494W8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CHRFAM7AQ494W8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHRFAM7AQ494W8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CHRFAM7AQ494W8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.12■■□□□ 1.29
CHRFAM7AQ494W8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHRFAM7AQ494W8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CHRFAM7AQ494W8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHRFAM7AQ494W8 ABHD17AP4-201ENST00000411545 909 ntBASIC23.11■■□□□ 1.29
CHRFAM7AQ494W8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.11■■□□□ 1.29
CHRFAM7AQ494W8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHRFAM7AQ494W8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHRFAM7AQ494W8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHRFAM7AQ494W8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC23.1■■□□□ 1.29
CHRFAM7AQ494W8 MIR3665-201ENST00000578708 105 ntBASIC23.09■■□□□ 1.29
CHRFAM7AQ494W8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.09■■□□□ 1.29
CHRFAM7AQ494W8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHRFAM7AQ494W8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.09■■□□□ 1.29
CHRFAM7AQ494W8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms